Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1797 ATGGGTGGAGAAGGTGCACATTCGAAGAGGAGAATCGCCATCATTAGCATCTCTACGATCTTGCTAGTGGCTATGGTGGTCGCCGCCACAGTCGGTGTCAACATCGCGCAATTCGGTTCGGACAGCGGCCCCACAAACAAAAACAAGGCCAACGTGTCTTCCTCCGTGAAAACAGTAACTGCCCTCTGCCACCCGACCGATTACAAGAAAGAATGCGAGGAGAGCCTGAAAGCCGAGGCCGGGAACACCACGGACCCAAGAGAACTCATCAAGATCGCATTCAACGTCACCATCAAGAAGATCGGCACGGCGCTCAACAAAACCCGTGTCTTGCAAGAGGCCGAGAAGGAACCAAGAGCGAGGTTGGCACTCGACACGTGTAAGCAGCTCATGGGCCTCTCCATCAACGAGTTCACGAAGTCATTGGAGAAAATGGGACATTTTGACCTTGACAACCTCGACAGCATCCTCACAAGCTTGAAGGTTTGGCTCAGCGGTGCGGTCACGTATCAAGAGACTTGCTTAGATGGTTTTCAGAACACGACGAGCCAGGCTGGGAAGAAGATGAAGGAAGTGTTGACAACTGCAAAGCAAATGACTAGTAATGCACTTGCAATTATTTCTGAACTCGCCAAAACTGTATCAGATATGAATGTGACAAAAGAAGGGCGGCGCCTAGATGAAGATTCTCACCACCAGAAACACGCGAGTTACCGACACAACGAAGGCATTGAGTTTCCCTCGTGGGTTGATGATGGAGCTGGCGTTCGTCGGCTCCTTCATGTGAGTCCGGGCAAGCTCAAGCCTCATGTGGTTGTGGCCAAAGACGGCACCGGGACGTTCGAGAGCATCCAGGAGGCGCTGAAGTGTGTGCCAAATAATAACCAGAAACCATTTGTGATATACATCAAGAAGGGCGTTTACAAAGAGTATATTGAGATTACTCAGCAGATGACCCACGTGGTGTTTGTTGGTGAAGGTGGTAAGAAGACGCGAATCACTGGCAACAAAAACTTTGTGGACGGGGTTAACACTTACAAAACCCCCACTGTAGTTATTCAAGGAGACTATTTTGTCGCCATCAATATGGGTTTCGAGAACTCCGCTGGTCCTCAAAAGTATCAAGCCGTAGCTGCTCGGGTCGAGTCAGACAGGTCCATCTTCTACAAGTGCTCATTCGACGGGTACCAGGACACACTCTACGCACACACCATGCGTCAATTCTACCGAGATTGCACCATTTCAGGCACCATTGACTTCATCTTCGGCGATGCAGCTGCCGTTTTCCAAAACTGCACTTTCGTGGTCCGAAAGCCACTGAAAGACCAGCAATGCATCGTGACGGCACAAGGAAGAACAGAGAGACACGAACCAACAGGAATAGTCATCCAAGGTGGCTCCATTGTGTCCGATCCAAAGTACGATTCAGTGAGGTTCGAGAACAAGGCCTACCTAGCACGTCCATGGAAGAATTACTCAAGGACCATCTTCATGGACACATACATTGGCGATTTGATTCAACCTGATGGGTATATGCCATGGTATGGGCCAGACGGCCCTTCGGGCATGGACACTTGCTTCTATGCCGAGTACAACAACACTGGTCCCGGTTCTAACAAATCGAAGCGTGTGAAATGGCCTGGGATCAAGCAACTCAACGAGATATCCGCGAGCGCTTTCTTCCCATCCAATTTCTTTCATGGAGATCAATGGATTCGGGGTACTAAGGTTCCTTACTCCCCGGATGCGATCTCCACCAAGGACTAA 1767 0.5003 MGGEGAHSKRRIAIISISTILLVAMVVAATVGVNIAQFGSDSGPTNKNKANVSSSVKTVTALCHPTDYKKECEESLKAEAGNTTDPRELIKIAFNVTIKKIGTALNKTRVLQEAEKEPRARLALDTCKQLMGLSINEFTKSLEKMGHFDLDNLDSILTSLKVWLSGAVTYQETCLDGFQNTTSQAGKKMKEVLTTAKQMTSNALAIISELAKTVSDMNVTKEGRRLDEDSHHQKHASYRHNEGIEFPSWVDDGAGVRRLLHVSPGKLKPHVVVAKDGTGTFESIQEALKCVPNNNQKPFVIYIKKGVYKEYIEITQQMTHVVFVGEGGKKTRITGNKNFVDGVNTYKTPTVVIQGDYFVAINMGFENSAGPQKYQAVAARVESDRSIFYKCSFDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDAAAVFQNCTFVVRKPLKDQQCIVTAQGRTERHEPTGIVIQGGSIVSDPKYDSVRFENKAYLARPWKNYSRTIFMDTYIGDLIQPDGYMPWYGPDGPSGMDTCFYAEYNNTGPGSNKSKRVKWPGIKQLNEISASAFFPSNFFHGDQWIRGTKVPYSPDAISTKD* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1797 588 CDD PMEI-like_3 61 212 - -
Dod06g1797 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Dod06g1797 588 SUPERFAMILY Pectin lyase-like 268 581 IPR011050 -
Dod06g1797 588 PANTHER PECTINESTERASE 11 581 - -
Dod06g1797 588 ProSitePatterns Pectinesterase signature 1. 295 314 IPR018040 -
Dod06g1797 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Dod06g1797 588 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Dod06g1797 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 210 IPR006501 GO:0004857
Dod06g1797 588 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Dod06g1797 588 Gene3D - 264 583 IPR012334 -
Dod06g1797 588 PANTHER PECTINESTERASE 11 581 - -
Dod06g1797 588 Pfam Pectinesterase 270 569 IPR000070 GO:0030599|GO:0042545
Dod06g1797 588 SMART PMEI_2 54 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1797 Dod-Chr6 24830027 24832909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1797 9 580 Carbohydrate Esterase AT3G05610 50.783 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1797 K01051 - gmx:100794799 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3338 01 74514277 74515335 Dod06g1797 06 24830027 24832909 PCT