Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1776 ATGGCGATGGCGAGAGCAAGCTCTGGGCTGCAATACCCAGAGCGCTTCTACGCCGCGGCCTCCTACGTTGGATTCGACGGATCCACCTCTCCCACCAAAGCCCTCACCGCCAAGTTCCCCAACTCCACCGCTCTCCTCCTCTACAGCTTGTACAAACAGGCTAGTGTAGGACGCTGTAACGTACCAGAACCCAGTTCGTGGAAGATTGTGGAGCATAGCAAATGGGCAAGCTGGAACCAGCTCGGAAACATGTCTTCCGCAGAAGCCATGCGTCTTTTTGTGAAAATCTTGGAGGAAGAAGATCCTGGCTGGTACTCAAGAGCATCTAACTCTGTTGTAGAGCCTGTTATAGATGTGCAAATAAATCACAATTCCAAAGTTGAACCAGTAGCTGAGAATGGCAACTCTTATCCAGAGACAAAGATTATTCCTACTGATAATGGAAGTCAATTTGGAACACAGGATAAAGATGTTGTTGTTGTTGAAGGCTTTGGTTCAGATGAAGTTTACGATCAATGGATTGCACCTCCAGTATCCAGTCAACGTCCAAAGGCCAGATATGAGCATGGGGCAGCAATCGTGCAAGATAAATTGTACATATATGGTGGAAACCACATTGGTCGTTACCTCAATGATCTTCATGTTTTAGATCTGAGAAGCTGGGCTTGGTCAAAGGTTGAGGCTAAGGTTGTAGTTGAGTCTACAGACTCATCATCCTCAGTAACATTAACCCCTTGTGCTGGCCATTCTCTGATTCCGTGGGAGAATAAGCTTCTGTCAGTTGCTGGGCATACTAAGGATCCTTCTGAAAGTCTCCAAGTGAAAGTTTTTGATCTGCAAATGGCAACTTGGTCAATTCTAAAGACATATGGGAAACCCCCGGTATCACGTGGGGGCCAATCAGTTACTTTAGTTGGCACAAGCTTAGTGATTTTTGGTGGACAAGACGCGAAGAGAACTCTATTGAATGATCTGCATATTCTAGACTTGGAAACCATGACATGGGATGAAATTGATGCTGTTGGGGTGCCTCCTTCTCCAAGGTCTGATCATGCTGCTGCTGTGCATGCGGAGCGATACTTGCTTATCTTTGGTGGAGGTTCACATGCAACTTGCTATAATGATTTGCATGTTCTCGATTTGCAGACTATGGAATGGTCTCGACCAACACAACAGGGCGAAATACCAACGCCACGTGCTGGACATGCTGGTGCAACAATAAGTGAGAACTGGTTCATTGTCGGTGGGGGTGACAATAAGAGTGGGGTCTCTGAGACTGTTGTGTTGAATATGTCTACACTTACATGGTCAGTGGTAACTTCTGTTCAAGGGCGTATTCCTGTTGCTAGTGAGGGCTTGAGTTTGGTTGTAAGCTCATATAATGGTGAAGACATACTCATATCATTTGGAGGGTACAACGGACGTTACAACAATGATGTCTATGTCCTTAAACCAAGCCACAAATCCACATTAGAGTCAAAAATAATTGAAAATCCCATACCAGACAGTGTTTCTGCTGTGCACAATGCCACAAATGCTACCCAAGATTTGGAGTCTGAATTTGAAGCAGGCCATGAAAGGAAAATCAGGGAACTTCTCGTGCACAATGGTGATTCAACAAAATTGAAAGGTGATCTTGTAACAGTCTTGAAGGCTGAGAAAGATGAATTTGAAACATCACTCAGCAACGAGAAGTTACATACTCTTAAACTAAAGCAAGATCTGGAAGAAGCTGAAGCTCGTAACTCTGACCTTTCCAAGGAGCTCCAATCAGTACGTGGTCAGCTTGCTGCTGAGCAGTCAAGATGTTTCAAGCTAGAGGTTGAGGTTGCTGAATTAGGACAGAAGCTTCAAACAATTGGGACATTACAGAAGGAACTTGAACTCCTCCAGCGGCAAAAATCTGCGTCTGAGCAGGCTGCCTTAAATGCAAAACAGAAGCAGGGCTCGGGTGGTGTGTGGGGTTGGCTTGCTGGTGGTCCCCCAAGCCAGGATGCTGATGATGCTTGA 2010 0.4562 MAMARASSGLQYPERFYAAASYVGFDGSTSPTKALTAKFPNSTALLLYSLYKQASVGRCNVPEPSSWKIVEHSKWASWNQLGNMSSAEAMRLFVKILEEEDPGWYSRASNSVVEPVIDVQINHNSKVEPVAENGNSYPETKIIPTDNGSQFGTQDKDVVVVEGFGSDEVYDQWIAPPVSSQRPKARYEHGAAIVQDKLYIYGGNHIGRYLNDLHVLDLRSWAWSKVEAKVVVESTDSSSSVTLTPCAGHSLIPWENKLLSVAGHTKDPSESLQVKVFDLQMATWSILKTYGKPPVSRGGQSVTLVGTSLVIFGGQDAKRTLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHATCYNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGATISENWFIVGGGDNKSGVSETVVLNMSTLTWSVVTSVQGRIPVASEGLSLVVSSYNGEDILISFGGYNGRYNNDVYVLKPSHKSTLESKIIENPIPDSVSAVHNATNATQDLESEFEAGHERKIRELLVHNGDSTKLKGDLVTVLKAEKDEFETSLSNEKLHTLKLKQDLEEAEARNSDLSKELQSVRGQLAAEQSRCFKLEVEVAELGQKLQTIGTLQKELELLQRQKSASEQAALNAKQKQGSGGVWGWLAGGPPSQDADDA* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1776 669 Gene3D - 6 114 IPR014352 -
Dod06g1776 669 Pfam Galactose oxidase, central domain 298 345 - -
Dod06g1776 669 MobiDBLite consensus disorder prediction 640 669 - -
Dod06g1776 669 SUPERFAMILY Kelch motif 243 488 IPR015915 GO:0005515
Dod06g1776 669 Pfam Acyl CoA binding protein 15 97 IPR000582 GO:0000062
Dod06g1776 669 Pfam Kelch motif 186 226 - -
Dod06g1776 669 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 22 666 - -
Dod06g1776 669 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 12 106 IPR000582 GO:0000062
Dod06g1776 669 Gene3D - 122 341 IPR015915 GO:0005515
Dod06g1776 669 Pfam Galactose oxidase, central domain 359 406 - -
Dod06g1776 669 Coils Coil 561 602 - -
Dod06g1776 669 Gene3D - 342 517 IPR015915 GO:0005515
Dod06g1776 669 SUPERFAMILY Acyl-CoA binding protein 14 105 IPR035984 GO:0000062
Dod06g1776 669 Coils Coil 613 647 - -
Dod06g1776 669 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4 22 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1776 Dod-Chr6 24539789 24550265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1776 1 667 Acyl Lipid Metabolism Gene Families AT3G05420 71.684 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1776 - - aprc:113863428 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1776 06 24539789 24550265 Dod06g1776 06 24539789 24550265 ECH
Dod01g2446 01 63401252 63406721 Dod06g1776 06 24539789 24550265 PCT