Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1736 ATGACAAACCACGCACCCGGCCACCGTCGAAATGACCGAATTACCCCTCTCTGCTTCCTCTTCCTCCTTGTCACACTCGCCGGAGCTCAATCCGACAGCAGCAACAACCAAAACGACCCAAACTACTACAACCGCTACAGCCCCTCGATGGCCATAATAGTTGTGATCCTCATCGCCGCACTCTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCTCCGACTCCGCCTCCGGCAGCGCCCTCCACCTCGCCGGCGCAGCCACCGGCCGATCCCGCCGCGGCACCCGCGGCCTCGACCGCTCCGTCATCGACTCCTTTCCGACCCTGGAATACTCCGTCGTGAAGGTCCACAAGATCGGAAAAGGCGCGCTCGAGTGCGCTGTATGCTTAAACGAGTTCGAGGACACCGAAACGCTGCGTTTGATCCCCAAATGCGACCACGTGTTCCACCCTGAGTGCATCGACGAGTGGCTCTCGTCGCACACCACGTGCCCCGTTTGCCGCGCCAACCTCGTTCCCCAACCAGGCGAGTCCGTACACGGCGTCCCGGAACTCCACGACGTCGAGGCGCAAAACGACGTCGTCGAGCCGGAACGTGAGAATCAAAACCCGGAGAATAATAATGTTAGTGTTTGTGGTGTGGAAGGTAATTCGGAACCGGAGGTGCTGTCTTTGAACAATAATAACACGACGCTGAGCAGGAACAGGACGAGGGGGTCGAGGTCGGGGAGGCCGAGGAGGTTCCCGCGGTCGCACTCGACGGGGCACTCTGTGGTGCAGCCTGGGGAGGACACGGAAAGGTTCACTCTGAGGTTGCCGCAGGAAGTGAGGAAGCAGATTCTGAAGAACCCGGAGTTGAGCCGAGCGAGGAGCTTGGTTATTTTGCCTAGAGAAGGGAGCTCCAGGCGAGGGTACCGAACCGGTGGTGGTGGCGGTGGCGATGGAAGCAGTAGGGGCGGCCGGTCTTCGAGACGGTTGGACCGCGGGTTTAAGTCGGACCGGTGGGTCTTCACGATGGCGCCGCCGTTTCTCGTGAGGGCGTCTTCCATTAGGTCTCCGAGGGTTGGGAATAGTTCCGGTGAAGGTTCGTCGGCGGTTGCGGCTGCGGAGGTTGCCCAACTGCCGGTTTGA 1137 0.6033 MTNHAPGHRRNDRITPLCFLFLLVTLAGAQSDSSNNQNDPNYYNRYSPSMAIIVVILIAALFLMGFFSIYIRHCSDSASGSALHLAGAATGRSRRGTRGLDRSVIDSFPTLEYSVVKVHKIGKGALECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGESVHGVPELHDVEAQNDVVEPERENQNPENNNVSVCGVEGNSEPEVLSLNNNNTTLSRNRTRGSRSGRPRRFPRSHSTGHSVVQPGEDTERFTLRLPQEVRKQILKNPELSRARSLVILPREGSSRRGYRTGGGGGGDGSSRGGRSSRRLDRGFKSDRWVFTMAPPFLVRASSIRSPRVGNSSGEGSSAVAAAEVAQLPV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1736 378 MobiDBLite consensus disorder prediction 203 240 - -
Dod06g1736 378 CDD RING-H2_EL5_like 127 170 - -
Dod06g1736 378 SUPERFAMILY RING/U-box 122 177 - -
Dod06g1736 378 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Dod06g1736 378 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 19 321 - -
Dod06g1736 378 MobiDBLite consensus disorder prediction 297 329 - -
Dod06g1736 378 MobiDBLite consensus disorder prediction 350 378 - -
Dod06g1736 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 175 IPR013083 -
Dod06g1736 378 PANTHER RING FINGER DOMAIN-CONTAINING 19 321 - -
Dod06g1736 378 Pfam Ring finger domain 127 170 IPR001841 -
Dod06g1736 378 MobiDBLite consensus disorder prediction 197 269 - -
Dod06g1736 378 SMART ring_2 128 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1736 Dod-Chr6 23846118 23848164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1736 14 368 Rapid Response to Elicitors AT3G05200 48.066 4.83e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1736 K10664 - gmx:100810865 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3400 01 75167459 75169139 Dod06g1736 06 23846118 23848164 PCT