Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1725 ATGGGAGCACAAGTCGCTGCACGCCTTTTATTTCACCACCTGTCCACAGCCTTATGGACTCATGCCATGCAACTATGCAAGAGAGAGAAAGAAAGAAAGCAAAGGAGGGACCCTAATAAAAGCTCTGAGAATAAATCAAAGAAGGTACCAATGTATGATGCTTTTAATCTTAAAACCAAGACGCTAGGATACTTGAGGGCTTTGGACTTAGAGAAAGAGAAAGAAGATGAGGCATCTCCAAGGGGTGTCTTAGAAGGCTATATTAGAACCTTTGACTCGAAAAAACAGCCACCTGAATCAGATGCCAATAGTTCAAGTTCGAGGGCACGGTCTCACTGGGAAAAATTCTCCAAATTGTGGAAAAAAAAATCAACTAAGCGTTTGCCGTCCTTCCCTCCTATTGGTGTGCCAAAGATACCAAAGTGGAAAAGCCAAAGTACTAAAGAAAATACTACTCTTAGTAATCTATACAACTTCAGGACTTCTTTAGTGACTTTCAGCCTTTCTGAACTGAGAAGTGCAACCAACAATTTTAGCAGTGAAAATATAATTGGAAGAGGTGGTTTTTCTGAGGTTTACAAGGGTTGTCTCCAAGATGGGAAACTAATAGCTGTGAAGAAAATGACTAAAGGAACTACAGATGAGAAGACAGCAGGCTTTTTATCTGAGCTAGGTGTGATTGCCCATGTTGACCATCCTAATACTGCCAAGCTTATTGGATGTGGTGTAGAAGGAGAAATGCACCTTGTCTTTGAACTATCTCCATTGGGAAGTTTAGGATCTCTTCTTCATGGACCAGATAAAGACAAACTAGATTGGAGTAAGAGGTATAAAATTACTCTAGGAATAGCTGATGGTCTGCTTTATCTGCATGAGAGTTGTCACAGGCGAATCATTCATAGAGATATTAAAGCAGAGAATATTCTGCTCACAGAGAATTTCGAGCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTGCCAGAACAATGGACTCACCACAATGTATCAAAATTTGAAGGCACATTTGGGTATTTTGCTCCCGAATATTGCATGCACGGCATAGTAGACGAGAAAACCGATGTTTATTCTTTTGGAGTTTTACTTCTGGAGATCATAACAGGGCGTCGAGCTTTGGATCATATGCAAAAAAGTGTTGTGTTATGGGCCAAACCATTGCTCGACGCCAAAAATATCGAGGACCTTGTTGATCCTTCTGTTGGTGATGATTATGATATAGAACAGATGCGTCATGCTGTTTTTACTGCATCAGTGTGTGTTGAGCAGTCTCCTATCTTGCGGCCCCGCATGAGTCAAGCAAGTACTCAACAACCTAGCAAGTTTGACTCTCTTGAAATGTTCATTCAAATTGAAATTTCATACAATGGCTTCCCTACCATCTTAATGGAAGAAAACTAG 1419 0.4066 MGAQVAARLLFHHLSTALWTHAMQLCKREKERKQRRDPNKSSENKSKKVPMYDAFNLKTKTLGYLRALDLEKEKEDEASPRGVLEGYIRTFDSKKQPPESDANSSSSRARSHWEKFSKLWKKKSTKRLPSFPPIGVPKIPKWKSQSTKENTTLSNLYNFRTSLVTFSLSELRSATNNFSSENIIGRGGFSEVYKGCLQDGKLIAVKKMTKGTTDEKTAGFLSELGVIAHVDHPNTAKLIGCGVEGEMHLVFELSPLGSLGSLLHGPDKDKLDWSKRYKITLGIADGLLYLHESCHRRIIHRDIKAENILLTENFEPQICDFGLAKWLPEQWTHHNVSKFEGTFGYFAPEYCMHGIVDEKTDVYSFGVLLLEIITGRRALDHMQKSVVLWAKPLLDAKNIEDLVDPSVGDDYDIEQMRHAVFTASVCVEQSPILRPRMSQASTQQPSKFDSLEMFIQIEISYNGFPTILMEEN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1725 472 Pfam Protein tyrosine and serine/threonine kinase 181 388 IPR001245 GO:0004672|GO:0006468
Dod06g1725 472 Gene3D Transferase(Phosphotransferase) domain 1 255 456 - -
Dod06g1725 472 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 63 443 - -
Dod06g1725 472 ProSiteProfiles Protein kinase domain profile. 178 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1725 472 PANTHER OS08G0249100 PROTEIN 63 443 - -
Dod06g1725 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Dod06g1725 472 ProSitePatterns Protein kinases ATP-binding region signature. 184 207 IPR017441 GO:0005524
Dod06g1725 472 MobiDBLite consensus disorder prediction 29 47 - -
Dod06g1725 472 MobiDBLite consensus disorder prediction 29 52 - -
Dod06g1725 472 SUPERFAMILY Protein kinase-like (PK-like) 152 440 IPR011009 -
Dod06g1725 472 MobiDBLite consensus disorder prediction 89 110 - -
Dod06g1725 472 Gene3D Phosphorylase Kinase; domain 1 139 252 - -
Dod06g1725 472 SMART serkin_6 178 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1725 Dod-Chr6 23666832 23670525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1725 163 440 Receptor kinase-like Gene Family AT1G53420 44.211 5.28e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod06g1725 PK_Tyr_Ser-Thr 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1725 - - cam:101512181 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3418 01 75342004 75346471 Dod06g1725 06 23666832 23670525 PCT