LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod06g1719	ATGGCTGGGAGTAACCAACTTAATCCCAACGACTCTAAGATGGTGGTTCCACTGAATATGTGGGTTCTCATATCCAATTTTAAGTTGGCATACAATCTTCTTCGCCGCCCAGATGGCACTTTCAACCGGGACTTAGCAGAGTTCCTTGACCGGAAAGTTCCTGCCAATGCCAACCCCGTGGATGGAGTGTTCTCCTTTGATGTTGTTGTCGACTGCCAGACGAGTCTCCTCACTCGAATTTATAGGCTTGCAGAGGAAGGAGAGGAGCATGTGAACACTGTTGATCTTGAGAAGCCTGTAACCTCTGAGGTCCTTCCTGTCATCATATTCTTTCATGGTGGCAGCTTTGCACATTCTTCGGCTAACAGTGCTATATATGACACCTTATGTCGCCGGCTGGTGGGGCTTTGTAAGGCTGTTGTGGTCTCTGTGAATTATAGGCGTGCGCCGGAGAACCGGTATCCTTGTGCTTATGATGATGGCTGGACAGCTCTTAAATGGGTTAATTCTAGGCCTTGGCTTCAGAGTAGGAAGGACAAGAAAGTTCACATCTACATGGCTGGGGATAGCTCAGGTGGGAACATTGTGCACCATGTTGCTTTGAGAGCTGTGGAATCCGGAATAGAACTGTTGGGGAATATACTGCTCAATCCATTGTTTGGTGGGGAAGAAAGAACTGAGTCTGAAAAGAGATTAGATGGGAAGTATTTTGTTAGGCTGAAAGATCGAGACTGGTATTGGAGGGCTTTTCTTCCAGAAGGGGAAGATAGGGACCACCCTGCATGTAACCCTTTTGGCCCCAAGGGCAGAATCCTTGAAGGGATTGCCTTTCCCAAGAGCCTTGTTGTGGTTGCTGGTTTAGACCTGGTTCAGGACTGGCAGTTGGCTTATGCCAAAGGGCTTGAGAAGGCTGGCCAAGATGTGAAGCTGCTGTTCCTGGAGAAGGCAACTATTGGGTTTTACTTGTTGCCAAATAATGAACACTTCTCCACCGTCATGGAAGAGATTAAGAATTTTGTGAGCCCTGACTGTTCATAG	1038	0.4759	MAGSNQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVVVDCQTSLLTRIYRLAEEGEEHVNTVDLEKPVTSEVLPVIIFFHGGSFAHSSANSAIYDTLCRRLVGLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRPWLQSRKDKKVHIYMAGDSSGGNIVHHVALRAVESGIELLGNILLNPLFGGEERTESEKRLDGKYFVRLKDRDWYWRAFLPEGEDRDHPACNPFGPKGRILEGIAFPKSLVVVAGLDLVQDWQLAYAKGLEKAGQDVKLLFLEKATIGFYLLPNNEHFSTVMEEIKNFVSPDCS*	346

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod06g1719	345	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative serine active site.	184	196	IPR033140	-
	Dod06g1719	345	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	108	124	IPR002168	GO:0016787
	Dod06g1719	345	PANTHER	ARYLACETAMIDE DEACETYLASE	2	341	-	-
	Dod06g1719	345	PANTHER	GIBBERELLIN RECEPTOR GID1C	2	341	-	-
	Dod06g1719	345	Gene3D	alpha/beta hydrolase	1	341	IPR029058	-
	Dod06g1719	345	Pfam	alpha/beta hydrolase fold	108	321	IPR013094	GO:0016787
	Dod06g1719	345	SUPERFAMILY	alpha/beta-Hydrolases	86	340	IPR029058	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod06g1719	Dod-Chr6	23590553	23592456	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod06g1719	1	344	Carbohydrate Esterase	AT3G05120	75.072	0.0	554

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod06g1719	K14493		-	gmx:100775474	629.402

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