Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1712 ATGGGGCTCGAATTAGGCACTGTGGTTTCAAAACTGCAAATGATGGTTTCAACTTCTGATCACTCCTCCGTGGTCTCTATGAACCTGTTTGTTGCACTTCTGTGTGCTTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCCATCACTGCCCTTTTGATTGGTGTTTGCACTGGCGTGGTCATTCTGCTGTTTAGTGGTGGCACAAGCTCACATATTCTTGTTTTCAGTGAAGATCTTTTCTTCATATACCTTCTGCCACCTATAATATTTAATGCTGGGTTTCAGGTTAAAAAGAAGCAGTTCTTTGTTAACTTCATCACCATCATGTTGTTTGGTGCTATCGGTACATTAATATCTTGTACCATCATAACTTTGGGTGTTACACAAGTTTTTAAGAGGATGGGTATTGGTCCAATGGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGACTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTACTGTACAGTCTTGTATTTGGGGAAGGTGTTGTGAACGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGTTTTGACCTCGACAAAATTGACCCTTCAATTGCTTTGCAATTCGTTGGCAACTTCTTGTATCTGTTTATCACAAGCACATTGCTTGGGGTTTTGGCGGGGCTACTTAGCGCTTACATTATTAAAAAGCTGTATATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTACATGTTGGCTGAATTATGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGAATTGTTATGTCTCATTATACATGGCATAATGTGACCGAGAGTTCAAGAATCACTACCAAGCATGCTTTTGCAACCTTGTCGTTTGTTGCCGAGATCTTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGGTTTGTCAGTGATAGCCCTGGAACATCGGTAGCTGTGAGTTCAGTATTGGTGGGTCTAGTGCTTGCCGGAAGAGCAGCTTTTGTCTTCCCCTTATCATTCCTATCCAACTTGGCTAAAAAGTCGTCGAGTGACAAAATCACCTTTAGGCAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCTCTTGCTTATAATCAGTTCACCAGGTCGGGGCACACTCAACAGAAATCCAATGCAATCATGATCACTAGCACCATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGCTTTTGCTGCCTCATTGCCCTCATAAAGCCACAAACAGCACAATGACCACAGAAGCCTCTACTCCAAAATCAGTCACTGTCCCGCTTCTAGAAAGGGCCCAAGAATCTGAGGCTGATCTTGAGGGCCATGAAATTCATCGCCCGAGCAGCCTCCGCGCCCTGCTAGCCACTCCGACACACACTGTCCATCGGTTATGGCGCCGGTTCGATAATGCATTCATGCGTCCCGTATTTGGTGGCAGGGGTTTTGTACCTGTAGAGCCTGGCTCACCAACTGAACGCAATGGTCATGCATGGCATTGA 1635 0.4434 MGLELGTVVSKLQMMVSTSDHSSVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGVCTGVVILLFSGGTSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIGTLISCTIITLGVTQVFKRMGIGPMEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLDKIDPSIALQFVGNFLYLFITSTLLGVLAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFLFLYVGMDALDIEKWRFVSDSPGTSVAVSSVLVGLVLAGRAAFVFPLSFLSNLAKKSSSDKITFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQQKSNAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHCPHKATNSTMTTEASTPKSVTVPLLERAQESEADLEGHEIHRPSSLRALLATPTHTVHRLWRRFDNAFMRPVFGGRGFVPVEPGSPTERNGHAWH* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1712 544 Pfam Sodium/hydrogen exchanger family 31 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod06g1712 544 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod06g1712 544 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod06g1712 544 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod06g1712 544 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod06g1712 544 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 543 - -
Dod06g1712 544 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod06g1712 544 Gene3D - 146 198 - -
Dod06g1712 544 PANTHER SODIUM/HYDROGEN EXCHANGER 8 543 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1712 Dod-Chr6 23486152 23492513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1712 5 541 Antiporters AT3G05030 76.809 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1712 - - gmx:732573 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3440 01 75605328 75610992 Dod06g1712 06 23486152 23492513 PCT