Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1711 ATGTTGACTGGTAAGATTGTTGCATTGAAGAAGGTTCGATTCGACAATTTGGAACCTGAGAGTGTTAAGTTCATGGCTAGAGAGATTATTATTTTGCGAAGATTGGATCATCCCAATGTTATAAAGCTAGAGGGTTTAGTTACATCGAGAATGTCTTTGAGTTTGTATCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCAGCAAGCCCTGAAATCAAGTTCACAGAACCTCAGGTCAAATGTTACGTGCATCAACTGCTATCAGGACTGGAGCACTGTCATAAACGAAATGTACTTCATCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCTGATTTTGGACTTGCATCATTCTTTGATCCAAACCGCAGGCATCCCATGACTAATCGTGTAGTTACCCTTTGGTATCGACCTCCAGAATTGCTTCTTGGTGCCACAGAGTATGGTGTGGGCATTGACCTTTGGAGCGCTGGTTGCATTTTAGGAGAGTTATTGGCTGGGAAACCAATTATGCCTGGTCGTACAGAGGTGGAACAGTTGCATAAGATATACAAACTTTGTGGTTCGCCTTCTGATGAGTATTGGAAGAAATCAAAGTTGCCTAATGCTACCCTGTTTAAACCTAGAGAACCATACAAGAGATGCATAAGAGAGACCTTTAAAGATTTTCCACCTTCTGCACTGCCCCTTATTGATACTCTTCTTGCAATCGACCCAGCAGAACGGAAAACTGCCTCAGACGCTCTAAGAAGTGAGTTCTTTACTACAGAACCTTATGCTTGTGACCCATCTACTCTTCCAAAATATCCCCCAACAAAGGAAATGGATGCTAAACGACGTGATGATGAAGCTAGGAGATTAAGAGCTGCAGGAAAAGCTCATGCTGATGGCACGAAGAAGCATCGTACACGGGAACGTGCTGTAAAAGCTATTCCTGCTCCTGAAGCCAATGCTGAGCTTCAACCCAATATCGATAGAAGGCGCCTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAGAAGTTCCCTCCACCGCACCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCAAATCATATTGATCCAGATATTGTCCCTCATGATGTCTCTTTCGTTTCGGCCTCATCATATACCTATTCAAAGGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAATCCTGCTAGCATCGGCGCGCCAAAGCAGAAGAAACACAACGCAGGTGATGCATTGGATTTGTCAAAACCGCATAAAGGTAGCCACAAGGTTAAAGGAAAGAAAATCATAGTTTAG 1329 0.4274 MLTGKIVALKKVRFDNLEPESVKFMAREIIILRRLDHPNVIKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPEIKFTEPQVKCYVHQLLSGLEHCHKRNVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRRHPMTNRVVTLWYRPPELLLGATEYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALRSEFFTTEPYACDPSTLPKYPPTKEMDAKRRDDEARRLRAAGKAHADGTKKHRTRERAVKAIPAPEANAELQPNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSNHIDPDIVPHDVSFVSASSYTYSKEPFQAWSGPIGNPASIGAPKQKKHNAGDALDLSKPHKGSHKVKGKKIIV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1711 442 MobiDBLite consensus disorder prediction 400 442 - -
Dod06g1711 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Dod06g1711 442 PANTHER CELL DIVISION PROTEIN KINASE 2 421 - -
Dod06g1711 442 Gene3D Transferase(Phosphotransferase) domain 1 64 304 - -
Dod06g1711 442 Gene3D Phosphorylase Kinase; domain 1 1 62 - -
Dod06g1711 442 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1711 442 SUPERFAMILY Protein kinase-like (PK-like) 2 272 IPR011009 -
Dod06g1711 442 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1711 442 Pfam Protein kinase domain 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1711 442 PANTHER OS01G0367700 PROTEIN 2 421 - -
Dod06g1711 442 CDD STKc_CDK9_like 3 265 - -
Dod06g1711 442 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1711 Dod-Chr6 23464211 23469101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1711 3 303 Core Cell Cycle Gene Families AT5G10270 52.366 1.04e-107 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod06g1711 Pkinase 1.3e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1711 K08819 - gmx:100817289 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3445 01 75653016 75656670 Dod06g1711 06 23464211 23469101 PCT