Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1689 ATGCTTGAACCGGATGATTCTGAGTTTGTTGAAGTTGATCCTACTGGCAGATATGGAAGATACAATGAAATCCTCGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTCTATGATTTCCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACGTTGAAGCACAGGAACATCATGAAATTTTATACCTCTTGGGTGGATACTGCAAATAGGAACATAAATTTCGTCACTGAATTGTTCACTTCTGGTACTCTTAGACAATATCGGCAAAAGCATAAGAGAGTTCACATAAGAGCAGTGAAGCATTGGTGTAAACAGATCCTGAAAGGACTTCTCTATCTTCATAGCCATGACCCGCCTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTATCAATGGAAACCAAGGGGAAGTGAAGATTGGAGATCTTGGCCTCGCAGCGATTCTCCGAAAATCTCACGCCGCTCATTGTGTAGGAACGCCCGAGTTTATGGCCCCTGAAGTTTATGAGGAGGCATACAATGAATTAGTAGACATATATTCCTTTGGTATGTGCATACTAGAGATGGTCACCTTTGAATATCCTTACAGTGAATGCACTCATCCAGCGCAAATCTACAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTGTACAAAGTGAAGGATCCAGAAGTGCGCCAATTTGTTGAGAAATGCTTGGCAACTGTGGCTTTAAGGCTCTCTGCAAGGGAGCTTCTAGATGACCCATTTCTTCGAATTGATGATTATGATTATGATTTGAGACCTGTAGACAGTGGGGAATTGGATGACTTGGGTCCTCTCATCAGGCAGCCATTTTTTTATCTTCACCGAAGCTATAGTAACTTAAGTAACGAATACTCAAATGGTTTTGGGTATGAAGGAGACTGGAGTTCACATCCAGCTGAGATGGAACCTAATGGTATTGAGCTATTTGAGTACCATGATGATGATGAACTGTCCGAAGATGTTGGCATAAGCATCAAGGGGAAGAGAAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGTGGACAATGAAGGTCGTATTCGAAATATTTATTTCCCATTTGACATTGTGATGGACACAGCAATAAGTGTGGCAGCTGAAATGGTCGCAGAACTCGACATTACTGATCAGGATGTTACCAGAATAGCAGATATGATGGATGGGGAAATTGCTTCCTTGGTACCTCAATGGAGGCTTGGACCAGGAATCGACGAAACTCCCCAATTTTCAAATCAAGGTTTCTGTCGCAACTGTGTGTCTAATCATACTTCCGGTGGCTCTCTTCTGGATTTTATTTCACAAAATCCAGGTAGCAAAAGCCTGCAACTTCTTGATTGCTGTAAGCATGGATGTGCTTCAATGCATGGCCGGTTTGAGGAAATCACCTTCCAATCCAAGGAGTATGACAATCATGTCGGACAGGATGTACCTAACATAACAAGCCAGTCACACTGTTTGCAGTATGAGGTGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAGTAGAGTCTGACCAAAGCCATTCCGACGAACAATATGAACAACTAGATAAATCGATTACAGCTGAAGATAAAGGGCAGGATGCTTGGGAAACCGAGTTTGTCCCCCAGTGCAAGAAACTCTCTTTGAAATCTGTCAGGAAGGCAGTGATTTCTCTACAATCCGTTTCTTATATTGTGAGCTGGAGGATGACTATGAGAAAGAGATCCAAAAGGAGCTTAGATGGCTCAAAGCAAAATACCAAATGGAGTTAA 1863 0.4192 MLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRQKHKRVHIRAVKHWCKQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYKVKDPEVRQFVEKCLATVALRLSARELLDDPFLRIDDYDYDLRPVDSGELDDLGPLIRQPFFYLHRSYSNLSNEYSNGFGYEGDWSSHPAEMEPNGIELFEYHDDDELSEDVGISIKGKRKDDGGIFLRLRIVDNEGRIRNIYFPFDIVMDTAISVAAEMVAELDITDQDVTRIADMMDGEIASLVPQWRLGPGIDETPQFSNQGFCRNCVSNHTSGGSLLDFISQNPGSKSLQLLDCCKHGCASMHGRFEEITFQSKEYDNHVGQDVPNITSQSHCLQYEVLWNQHESRELSPVESDQSHSDEQYEQLDKSITAEDKGQDAWETEFVPQCKKLSLKSVRKAVISLQSVSYIVSWRMTMRKRSKRSLDGSKQNTKWS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1689 620 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1689 620 SUPERFAMILY Protein kinase-like (PK-like) 22 277 IPR011009 -
Dod06g1689 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Dod06g1689 620 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1689 620 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 2 588 - -
Dod06g1689 620 Gene3D Phosphorylase Kinase; domain 1 3 100 - -
Dod06g1689 620 Gene3D Transferase(Phosphotransferase) domain 1 102 281 - -
Dod06g1689 620 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1689 620 CDD STKc_WNK 17 276 - -
Dod06g1689 620 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1689 Dod-Chr6 23059827 23062556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1689 5 496 MAP Kinase Kinase Kinase AT3G22420 58.148 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod06g1689 Pkinase 8.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1689 K08867 - gmx:100775959 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3471 01 75873379 75877676 Dod06g1689 06 23059827 23062556 PCT