Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g1680 | ATGTTTAATGGAGTACCAGACCAGTTCCACCAATTCATAACACCAAGGACCTCATCACTCCCTCTTCACTTACCCTTCCCTCTTCATGCTAACAATACTACCCCAAACAACACTTTCCCTGCTCCTTTTGATCCTTACAATCATCATCACAACCCTTCTCACCATCATCATCATCATCACCACCATCAATTTCCATCACTCCACCAAGTCCAACCCAATCTCTTGCACCCTGCTGCCCCATTACACCCCCACCAGTCTCCTTCTTCTTCTTCCACAGTACACAAGCATGAAGAGAAGGAAGAGAACAGCACCACAGTGCCAATGAACTTCGAAATTGAGAGAGATCAAAGGCAACAACTGCCCGAGCTGATTGATCCCTGGACTAACGACGAGGTGCTCTCGCTTCTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAGCTGGCAGAGCTTGGATATAAGAGGAGTGCAGAGAAGTGCAAAGAGAAGTTTGAGGAAGAGAGCAGATACTTCAACAACATTAATAACTACGGAAAGAGTAGTTACCGGTTTCTTAGTGAGCTTGAGGAGCTTTATCAAGGTGGGGGTGATCAAAACCCTCATAATCATCACAATCAAGAGGTTGAGAGTGAGAAGAATCATCATCAGCAAGTGGTGGAGAACCCAAGTGAGGGACAAGAAGAAGACAAGATGATGGGGAATGCATTGGAAGATCAAGATGGTTCAGTGACAAAACAAAAGGAGCATCATGAAGAGGTTGTGGCTATGGAGGAGAGAACTAATAATAAGGAGAGGAAGAGGAAGAGGGGTGGTAGTGGTGGTGGAAGGTTTGAGATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGAGCAGCAAGAGCAGATGCACAACAAGCTTATTGAGGATATGGTGAGAAGGGACGAGGAGAAGTTTGCTAGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAAAGGATGAACAAGGAGCTTGAGATTATGGCCCAGGAACAAGCCATTGTTGGTGATAGACAAGCCAACATCATTGAGTTCTTGAAGAAATTCTCCCCAGAAATTCAAAGCCTTGGAATTGGCAATAATGACAACAATGGAAGAGACAAATTAGTCAAGCCAACACCTTCTTCTGCTGTGATTCTCAATCCATCTTTAGTGGCAGCAGAAAACCCTAGCTCGAGTAGTAATCATCCTGCACAAGACGCATTACAAGTTGTTGCTTCTTCTACTACTGCTTCAGCTCCTCCTCCAGCTCCAGCTGGCAAGAACCCTAGTTCTTCACTCAACAATGATCCAATAGAGACAAATTCAGTTCCAAATAAGGCCACCTCAAACCGTGTGTCCACCAGCACTAGTACTACTGAGAAAGACGACATCGGGAGAAGGTGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTCAGGTGCACAAGCCAAAACAACAACAACAACAACAATAGTGAGGACAACAATAATAACAATAAGGAAGGGAATAACAAGGCTCCACTGTGGGAGAGAATCTCACAAGGGATGTTGGAGTTGGGGTACAACAGAACTGCCAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAAACAAAGGATGTAAACAAGAAAAGGTCACTTGATTCAAGGACTTGTCCCTATTTTCACCAACTGAGTAATCTGTATAGTCAAGGATTTCTTGTTCTACAACCTGAGAAGCAAGAAAACCAGCTGAATCCACCAGCAAATAATCATGGAAATGTGGTGACAGATCAGAATGAAACACAATTAGCTGAGACTTCTCAAGTGGTGGGGTCTGGTGGCTTCAGTGTGCAGGTTGATCATGGAGGTGAGAAAACTTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAA | 1944 | 0.4424 | MFNGVPDQFHQFITPRTSSLPLHLPFPLHANNTTPNNTFPAPFDPYNHHHNPSHHHHHHHHHQFPSLHQVQPNLLHPAAPLHPHQSPSSSSTVHKHEEKEENSTTVPMNFEIERDQRQQLPELIDPWTNDEVLSLLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNINNYGKSSYRFLSELEELYQGGGDQNPHNHHNQEVESEKNHHQQVVENPSEGQEEDKMMGNALEDQDGSVTKQKEHHEEVVAMEERTNNKERKRKRGGSGGGRFEMFKGFCESIVHKMMEQQEQMHNKLIEDMVRRDEEKFAREEAWKKQEMERMNKELEIMAQEQAIVGDRQANIIEFLKKFSPEIQSLGIGNNDNNGRDKLVKPTPSSAVILNPSLVAAENPSSSSNHPAQDALQVVASSTTASAPPPAPAGKNPSSSLNNDPIETNSVPNKATSNRVSTSTSTTEKDDIGRRWPKDEVLALINLRCTSQNNNNNNNSEDNNNNNKEGNNKAPLWERISQGMLELGYNRTAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSNLYSQGFLVLQPEKQENQLNPPANNHGNVVTDQNETQLAETSQVVGSGGFSVQVDHGGEKTLMQVPSLDFDQF* | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 212 | 284 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 50 | 65 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 202 | 285 | - | - | |
Dod06g1680 | 647 | ProSiteProfiles | Myb-like domain profile. | 478 | 547 | IPR001005 | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 33 | 106 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 422 | 478 | - | - | |
Dod06g1680 | 647 | Pfam | Myb/SANT-like DNA-binding domain | 125 | 200 | IPR044822 | - | |
Dod06g1680 | 647 | Pfam | Myb/SANT-like DNA-binding domain | 477 | 575 | IPR044822 | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 492 | 515 | - | - | |
Dod06g1680 | 647 | ProSiteProfiles | Myb-like domain profile. | 126 | 178 | IPR001005 | - | |
Dod06g1680 | 647 | PANTHER | - | 14 | 639 | - | - | |
Dod06g1680 | 647 | Gene3D | - | 127 | 183 | - | - | |
Dod06g1680 | 647 | Gene3D | - | 479 | 552 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 371 | 391 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 439 | 470 | - | - | |
Dod06g1680 | 647 | CDD | GT1 | 477 | 554 | - | - | |
Dod06g1680 | 647 | SMART | sant | 475 | 549 | IPR001005 | - | |
Dod06g1680 | 647 | SMART | sant | 123 | 180 | IPR001005 | - | |
Dod06g1680 | 647 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR GTL2 | 14 | 639 | - | - | |
Dod06g1680 | 647 | MobiDBLite | consensus disorder prediction | 492 | 516 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g1680 | Dod-Chr6 | 22881242 | 22883940 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g1680 | 126 | 579 | Trihelix Transcription Factor Family | AT5G28300 | 42.600 | 7.43e-102 | 321 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Dod06g1680 | Myb_DNA-bind_4 | 2.2e-18 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g1680 | - | - | gmx:100804367 | 647.506 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g3478 | 01 | 75951427 | 75954254 | Dod06g1680 | 06 | 22881242 | 22883940 | PCT |