Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1679 ATGGAGCAGTATGAAATACTTGAGCAGATTGGAAAAGGAGCTTTTGGTTCGGCGCTTCTTATGGAGCTCATTTCTAAATTTCGAAACCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTCTGCATTATCATTGGTTATTGTGAGGGTGGGGATATGGCGGAAGCTATAAAGAAAGCTAATGGTGTTCTGTTTTCGGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTATTTGCATATGAACCACATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACGAAAGATCAAGACATACGTCTAGGTGATTTTGGACTAGCCAAAATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTACGGTTCTAAATCAGATATTTGGTCACTGGGATGTTGTATATATGAAATGACATCGCTGAAGCCTGCATTTAAAGCATTCGATATACAAGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCATTACCAACAAAATATTCTGGTTCATTTCGAAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCCAGTGCTGCAGAGCTGCTTGGGCACCCACATCTTCAATCATATGTTCTTAAGATCCATCTCAAAATCAATAGCCCCAGGCGAAACACATTACCAGTTCATTGGCCAGAATCCAACTACATGAAGAAAACTAGATTTTTGGAACCAGAAGAGGATGTTTCCATCTATAGGAATAAGAGGCATTCTTTCTGCAATGACCGGACTCTAAACCCTAGTGTTTCTGGAGCTGATCAAGATTCTGTATGCTCCACCCTAGAAATAGATTGTATTCCAGATCATTTAAGTCAAAGGTTAGCAGAACTACACATCGGACAGAGCCATGAAGTGAAGTCAATCCACAAGCCTGTCACCTCCAGAACTTCTAGTATTGCTAAGACTCCAAGAATCACTTTATCAAAGGTTTCTGCTACCAACAAAAAATCAATGGAACCGAGAAAGAATCGTAAGGCAGTAAGGCAATCCCTTCCTGCTTCACAGAATTCCACAAAATCTGCCCATACAAATCGCAGAGCATCATTTCCATTGTCCTCAAAGGGTACTCAGCAGCCTCCTCGCAGGCCTAGTATTGGTTTGCTTAGCCACGTATCTTCGCCAGATATATCGGTTAACTCCCCGCGTATTGATAAGATAGCTGAATTCCCATTAGCATCCTATGAAGATCCATTGTTCCCTATCAACAGAACATCATCCTTCAGGCAAGGTTCCTCAGGCTACACATCTCGCGCCAATCAGTCGACTGTGATTGACAAATGCACGGTAGAGGTATGCGATAGAGCCTCTATTAAGCGCAGTTGTACTGATACTTGGCAGGGAATCAAGTGCAGCGTGTTAAAGGAAAATGACGAGGATAAAAGTGGTTCCTCAGATCAAAATGCAACAGCTGGTGCCTCAAGCCGCACCTCTTCGGACTTGCGCCGCCGGCAGTTTGACACTTCATCGTACCAACAAAGGGCTGAAGCCTTAGAAGGGTTGCTTGAGTTTAGTGCAAGATTGCTGCAGCAGGCGAGGTATGATGAACTCGGGGTTCTGTTGAAACCGTTTGGGCCCGGGAAGGTTTCCCCAAGAGAAACTGCTATCTGGTTGAGTAAGAGCTTCAAAGAGAACACATTCAACCCGGATGAATCCCCATAA 1776 0.4319 MEQYEILEQIGKGAFGSALLMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVLFSEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDIQALINKINKSIVAPLPTKYSGSFRSLVKSMLRKNPELRPSAAELLGHPHLQSYVLKIHLKINSPRRNTLPVHWPESNYMKKTRFLEPEEDVSIYRNKRHSFCNDRTLNPSVSGADQDSVCSTLEIDCIPDHLSQRLAELHIGQSHEVKSIHKPVTSRTSSIAKTPRITLSKVSATNKKSMEPRKNRKAVRQSLPASQNSTKSAHTNRRASFPLSSKGTQQPPRRPSIGLLSHVSSPDISVNSPRIDKIAEFPLASYEDPLFPINRTSSFRQGSSGYTSRANQSTVIDKCTVEVCDRASIKRSCTDTWQGIKCSVLKENDEDKSGSSDQNATAGASSRTSSDLRRRQFDTSSYQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPGKVSPRETAIWLSKSFKENTFNPDESP* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1679 591 PANTHER SERINE/THREONINE-KINASE NEK4 21 576 - -
Dod06g1679 591 SUPERFAMILY Protein kinase-like (PK-like) 1 279 IPR011009 -
Dod06g1679 591 MobiDBLite consensus disorder prediction 367 402 - -
Dod06g1679 591 SMART serkin_6 4 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1679 591 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1679 591 MobiDBLite consensus disorder prediction 502 517 - -
Dod06g1679 591 MobiDBLite consensus disorder prediction 324 416 - -
Dod06g1679 591 CDD STKc_Nek 3 227 - -
Dod06g1679 591 MobiDBLite consensus disorder prediction 495 524 - -
Dod06g1679 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Dod06g1679 591 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 21 576 - -
Dod06g1679 591 Pfam Protein kinase domain 22 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1679 591 Gene3D Transferase(Phosphotransferase) domain 1 1 280 - -
Dod06g1679 591 MobiDBLite consensus disorder prediction 330 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1679 Dod-Chr6 22841447 22852109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1679 21 229 MAP Kinase Kinase Kinase AT1G53570 33.649 1.71e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Dod06g1679 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1679 K08857 - gmx:100804898 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3479 01 75967960 75974510 Dod06g1679 06 22841447 22852109 PCT