Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1667 ATGACAAGTGCTATGGACGCAGAGCGAGACAAGTACAGCATGATGAATTTTGAGGAGACCGAGTTGCGACTCGGGCTGCCTGGTGGGTCGTCATCAAATGATGGCGAGTCATCATCATCAGCACTACTCATCAGGACCAATGGTGGGAATAATAAGAGGGGTTTCTCAGAGACTACTGCTGATGGTGTTGTGGATTTGAAACTTAATCTTTCTTCTTCCAATCGTGATGATTTGGGCTCTGCCTCGGTTTCAGCCTCATCTGTGGCCTTGGACAAGGCCAAAGAAAAGAGCAGCAGTAGTAGTAGCGACAGTATTACTACCGCTGCCATTGCTTCTCTCCCTCGTGCTAATGACCCAGCAAAACCTCCTGCTAAGGCACAAGTGGTGGGTTGGCCACCAGTTCGATCATTCAGAAAGAACATCGTGAATGTTCAAAGGAGCAACAAGGAAGAAGCAGCAGCAGAAAAGGCCACAACCACCACCACCACCGCGACGAGCAGTGGCGCCTTAAATAATGCAGCTTTCGTGAAGGTGAGCGTGGATGGTGCACCGTACCTACGCAAAGTGGACCTGAAGCTGTACAAGAGCTACAAGGAGCTGGCAGATGCGCTGGCTAAGATGTTCAGCTCCTTCACAATTAACGGCAATTGTGGGTCCCAAGCCATTGTTGACAATGAATGCATGAATGAGAGCAAAAAATTGATGCATCTTTTGAATGGCTCTGACTATGTCCCCACATATGAAGACAAGGACGGTGACTGGATGCTTGTCGGTGACGTGCCCTGGGAAATGTTCGTTGAATCATGCAAGCGCCTGCGCATAGTGAAAGGATCTGAGGCAATCGGGCTAGCGCCAAGGGCAGTAGAGAAGTGTAAGAACAGAAGCTGA 888 0.4944 MTSAMDAERDKYSMMNFEETELRLGLPGGSSSNDGESSSSALLIRTNGGNNKRGFSETTADGVVDLKLNLSSSNRDDLGSASVSASSVALDKAKEKSSSSSSDSITTAAIASLPRANDPAKPPAKAQVVGWPPVRSFRKNIVNVQRSNKEEAAAEKATTTTTTATSSGALNNAAFVKVSVDGAPYLRKVDLKLYKSYKELADALAKMFSSFTINGNCGSQAIVDNECMNESKKLMHLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIVKGSEAIGLAPRAVEKCKNRS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1667 295 MobiDBLite consensus disorder prediction 75 104 - -
Dod06g1667 295 MobiDBLite consensus disorder prediction 26 57 - -
Dod06g1667 295 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 288 IPR003311 GO:0005634|GO:0006355
Dod06g1667 295 PANTHER AUXIN-INDUCED PROTEIN AUX28 11 288 - -
Dod06g1667 295 SUPERFAMILY CAD & PB1 domains 168 274 - -
Dod06g1667 295 Pfam AUX/IAA family 19 286 IPR033389 -
Dod06g1667 295 ProSiteProfiles PB1 domain profile. 173 277 IPR000270 GO:0005515
Dod06g1667 295 MobiDBLite consensus disorder prediction 23 61 - -
Dod06g1667 295 Gene3D - 168 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1667 Dod-Chr6 22714593 22719217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1667 152 280 B3 DNA Binding Superfamily AT3G61830 28.682 1.96e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod06g1667 AUX_IAA 7.8e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1667 K14484 - qsu:112037338 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1667 06 22714593 22719217 Dod06g1667 06 22714593 22719217 ECH