Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1642 ATGAGTACATGCCTAATGGGAACCTTGGGACAGCACTGCACTGGTGAACAATGTGGGAGGTTGCTTGTGGACTGGGTCTCAAGGTACAACATAGCGCTTGGGGTTGCACAAGGGCTGAACTACCTTCACCATGATTGTCAACCACCAGTTATTCACAGGGATATCAAGTCCAACAACATACTCCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTCGGGTTGGCAAAGATGATGATCCAAAAGAATGAGACAGTTTCAATGGTGGCTGGATCTTATGGATACATTGCCCCAGAATATGGATATACTCTGAAGGTGGACGAGAAGATTGACATATACAGTTATGGTGTGGTGCTTCTAGAGCTCCTAACTGGGAAAATGCCTTTAGACCCTTCGTTTGAAGAATGTATAGACATAGGCGAATGGATAAGAAGGAAGAGGAGCAACAAAGCTTTGCAAGAAGCACTAGACCCCAGCATAGCAGGACAGTGCAAACATGTCCAAGAGGAGATGCTTCTTGTACTCAGGATCGCACTTCTATGCACTGCAAAGCTTCCAAAGGAAAGACCATCCATGAGAGATGTCATCACAATGCTTGGAGAGGCAAAGCCCAGAAGGAAAAGCGTTTGCCATAACAGGGGACAAGATAGTAGCAGCATGGAAAAGCCAATCTTTACCACTTCCCCAGTAGTAAGCCTTTTGTAG 705 0.4553 MSTCLMGTLGQHCTGEQCGRLLVDWVSRYNIALGVAQGLNYLHHDCQPPVIHRDIKSNNILLDANLEARIADFGLAKMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPSFEECIDIGEWIRRKRSNKALQEALDPSIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDVITMLGEAKPRRKSVCHNRGQDSSSMEKPIFTTSPVVSLL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1642 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Dod06g1642 234 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 9 216 - -
Dod06g1642 234 Pfam Protein kinase domain 30 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1642 234 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1642 234 SMART serkin_6 3 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1642 234 Gene3D Transferase(Phosphotransferase) domain 1 6 224 - -
Dod06g1642 234 SUPERFAMILY Protein kinase-like (PK-like) 4 199 IPR011009 -
Dod06g1642 234 PANTHER UNNAMED PRODUCT 9 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1642 Dod-Chr6 22293912 22295137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1642 7 234 Receptor kinase-like Gene Family AT1G08590 73.362 4.12e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod06g1642 Pkinase 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1642 - - gmx:100793873 405.601