Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1635 ATGTCTTCATCTTTTCCTGTTCTTCCCACATCCTCAACCCAGCCTGCATCAATCAATTCCAACATCAGAAGTGTTGTTGGACACATGTTTTCAACTCCTGCTGCTGATTTCCCTGATGGCAACCCTTTTCCCTCTGTTTCAGAATTACATTCTCCACCATTCATTTCTCACCCTCAAGAAAGTGATGATATTTTGTGGGGAGCAGAGTTGTTCCAGGATATGCTTTCATTTCCTGATAATGCTCCCGTCCAGAATGATCACATGGAATACACTGCTCCTTACACGTCTGGTGATAGTGCCAAAGCAAATGATGATGATGATTCTCTCCAGCCAAATTGGAATCAGTTTCTTGGTGATGATAATGTAGCTGAACCAAAATCAAAGGAGACTCAGGTTTCACTGCACCTGAATGCACCATCTGTGCAAGCTAATGATCTTCCTAACTCAGTGTCGACTGCACCACAACCTAAACCAAGAATGCGTTGGACTCCTGAACTTCATGAGGCTTTTGTGGAAGCTGTCAATCAGCTTGGTGATAAGGCTACTCCAAAGGGTGTCTTGACCCTGATGAAAGTTGAGGGCCTTACCATCTACCATGTGAAAAGCCACCTACAGAAATATAGAACTGCCAGATACAAGCCTGAGTCATCAGAAGGAATTCCTGAGAAAAACTTGACTACTTCAATCGAAGAAATGAAGCCTCTAGACCTAAAAACGGGTAAGGGCATTAACGAAGCATTGCAGTTGCAAATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAGAGTTGCAGATTCAAATTGAGAACCAAGGGAAGCGCCTTCAGATGATGTTTGAGAAACAGATGGAGATGGATGACAGCAAGCTTAAGGGCTCCTCCTCCTCATTGGAAAAGTCTTCTACAAATGAAAATTTAGAACCCTCAAATGAAGGTCATGTAAAATCTGGGATCAACAGGAGCACTTCAGAAACCATCCCTGAGGAAAGTTCTCAGGATGCAAATACAAAGCAAAAGGGAAATGATGCTAGTGCTACTGATGAACATGAACTGGGAGATGACCAGTTAGTTGCACCTCCCACAAAAAGGGTTAAGAGTTGA 1110 0.4315 MSSSFPVLPTSSTQPASINSNIRSVVGHMFSTPAADFPDGNPFPSVSELHSPPFISHPQESDDILWGAELFQDMLSFPDNAPVQNDHMEYTAPYTSGDSAKANDDDDSLQPNWNQFLGDDNVAEPKSKETQVSLHLNAPSVQANDLPNSVSTAPQPKPRMRWTPELHEAFVEAVNQLGDKATPKGVLTLMKVEGLTIYHVKSHLQKYRTARYKPESSEGIPEKNLTTSIEEMKPLDLKTGKGINEALQLQMELQKRLHEQLEIQRELQIQIENQGKRLQMMFEKQMEMDDSKLKGSSSSLEKSSTNENLEPSNEGHVKSGINRSTSETIPEESSQDANTKQKGNDASATDEHELGDDQLVAPPTKRVKS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1635 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 369 IPR044848 GO:0003700
Dod06g1635 369 Gene3D - 156 213 - -
Dod06g1635 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 212 IPR017930 -
Dod06g1635 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 157 209 IPR006447 GO:0003677
Dod06g1635 369 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 369 - -
Dod06g1635 369 Coils Coil 244 264 - -
Dod06g1635 369 MobiDBLite consensus disorder prediction 297 344 - -
Dod06g1635 369 Pfam Myb-like DNA-binding domain 159 208 IPR001005 -
Dod06g1635 369 MobiDBLite consensus disorder prediction 345 359 - -
Dod06g1635 369 SUPERFAMILY Homeodomain-like 156 209 IPR009057 -
Dod06g1635 369 MobiDBLite consensus disorder prediction 287 369 - -
Dod06g1635 369 MobiDBLite consensus disorder prediction 87 109 - -
Dod06g1635 369 Pfam MYB-CC type transfactor, LHEQLE motif 243 287 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1635 Dod-Chr6 22161917 22166312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1635 48 299 G2-like Transcription Factor Family AT3G04450 49.091 3.69e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod06g1635 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1635 - - mtr:MTR_1g080330 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3524 01 76517954 76520761 Dod06g1635 06 22161917 22166312 ECH
Dod06g1635 06 22161917 22166312 Dod06g1635 06 22161917 22166312 ECH
Dod01g2570 01 64900213 64906848 Dod06g1635 06 22161917 22166312 PCT
Dod01g3524 01 76517954 76520761 Dod06g1635 06 22161917 22166312 PCT