Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1632 ATGAGGATTATGATAAAGGGTGGTGTGTGGAAGAACACGGAGGATGAGATCCTAAAGGCGGCTGTTATGAAATATGGGAAGAATCAGTGGGCTCGAATCTCTTCCCTTCTCGTTCGCAAATCCGCTAAGCAATGCAAGGCTCGCTGGTACGAGTGGCTCGATCCTTCCATCAAGAAGACTGAGTGGACGAGAGAAGAGGATGAGAAGCTGCTTCATCTTGCCAAGCTTATGCCAACGCAGTGGAGAACGATTGCTCCGATTGTAGGCCGTACACCTTCACAGTGCCTTGAGCGCTACGAGAAGCTCCTAGATGCAGCTTGTGTAAAGGATGAGAACTATGAACCTGGCGATGATCCTCGGAAATTGCGTCCTGGGGAGATTGATCCGAATCCAGAGTCAAAACCTGCACGCCCGGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAACACGAAAGGAAAGAAGGCAAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGGAGACTTGCTTCTTTGCAGAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATATCAGGCAGCGGAAGAGAAAAAGGAAGGGAATAGACTACAATGCGGAAATCCCTTTTGAGAAAAGGCCTCCTCCAGGTTTTTTTGACGTTACGGAAGAAGATAGACCGGTAGAACAGCCCAAGTTCCCTACTACGATAGAAGAACTTGAGGGAAAAAGAAGGGTTGATGTCGAGGCACAGTTAAGAAAGCAAGACATTGCAAGAAATAAAATTGCGGAAAGGCAAGATGCCCCATCTGCTATACTGCATGCTAACAAGCTGAATGATCCAGAAACAGTAAGAAAGCGGTCAAAACTGATGCTTCCGCCACCCCAGATTTCTGATCAGGAACTGGATGAAATTGCAAAGATGGGTTATGCCAGTGACCTAGCTGGGAGTGAGGAACTTGCAGAAGGTAGTGCTGCAACACGTGCTCTTCTGGCGAATTATGCACAAACTCCTGGCCGAGGAATGACTCCTTCACGAACCCCTCAGAGGACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAACCTGGCCAGGTTGAGGGAGTCTCAGACGCCATTATTTGGGGGAGAGAACCCCGAGTTGCATCCTTCGGATTTTTCTGGAGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAATCCAATGCTGACTCCCTCTGCAACTCCTGGAGGGGCAGGTCTCACTCCCAGAATTGGCATGACACCAGCAAGAGATGGTTACTCTTTTAGCATGACGCCGAAGGGAACTCCTCTCAGGGATGAGCTACGTATTAATGAGGAGATGGATATGCATGAAAGTGCTAAACTCGAGCTACAAAGACAAGCTGATCTGAGAAGAAGTTTGCGCTCTGGTCTAGGAAGTCTTCCACAGCCTAGAAATGAGTACCAGATAGTCATGCAGCCAGTTCCAGAAGATGCTGAAGAACCTGAGGAGAGGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAGGAAGCACGGCAACAGGCATTACTTAGAAAACGATCAAAAGTTCTTCAAAGGGAACTTCCGAGGCCTCCGGCTGCATCTTTGGAGCTTATAAGAAATTCTTTGATGAGAGCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATAAGAAGGGAGCTTCTAGCTTTGCTGGAACATGACAATGCCAAGTATCCACTTGAGGAGAAACTGAGTAAGGAGAAAAAGAAAGGAGCCAAGCGTGCAGTAAATGAACCTGCTGTCCCAGTGATAGAAGATTTTGAGGAAGATGAGATGAAAAATGCTGATAAGTTGATAAAAGAAGAGGCCCAGTATATTCGTATCACGATGGGGCATGAAAGTGAACCCCTTGATGAATTTATTGAAGCACATAGAACTAGCCTGAATGACCTCATGTACTTTCCCACCCGTAATGCCTATGGTCTTTCAAGTGTTGCTGGAAACATGGAAAAGCTGGCGGCTTTACAGAATGAATTTGAGAATGTGAGAAACAAGTTGGATGATGGCAAGGAGAAGATAGTACGGCTAGAGAAGAAGGTGATGGTTCTCACGCAAGGATATGAGACAAGAGCCAAAAAAGGCCTTTGGCCGCAGATTGAGGCCACTTTCAAGCAAACGGACATAGCTGCAACAGAATTAGAATGCTTCGAAGCTTTGCAAAAGCAGGAGCAGCTAGCAGCATCACACAGGATAAACAATCTACGGGATGAAGTACAGAAGCAAAAGGAACTTGAGAGAACTTCGCAAAATAGGTATGGGAGTCTTATGGAAGAGCTGGAAAAGATACAAAATATCATGGACCAATACAGGGTACAAGCACAACAGCAAGAGGAAATTGAAGCAAACAATCGAGCTCATGAGTCAACAGAGAGTGTAGCTGATGAAACTGTTGTGCAGGATACAGAGAATTCTAAAGCTGTGCCTCAGTCAGTTGAAAATGGGAATGCTATTGCAGTTGATCCATCTCATGATGAAACCACTGACCAGCAAGTTGGCACCGTGCGAGACCAGACTACTGCTAGCCCCAAAAATGACATGGATGTGGATTCTGGTAGCAAGCAAATGACAGACGACACTGATGGAAAATTGTCAGATGCTACACCTGCCACTGAGGATGACACTGGAAAAGTGGAAGGTATCACCACTGGTGGTTACATTGACAATGGGGAGGCCACACTGGATGAGGGTGCCGCAGCGGCTGCAGAAACAAGAAGTATTGAGGGAAATAAGGAGGATCAAGATGTAGTTATGGATGCTGCAAACTCTCATGATGACAGCACACAAGAAACCACTGCTGATGATGATGGGGATAAGATGCAAGTTGCTGACGGCAATGGAGAGGGGACAAATTAG 2964 0.4639 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVTEEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIARNKIAERQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKMGYASDLAGSEELAEGSAATRALLANYAQTPGRGMTPSRTPQRTPAGKGDAIMMEAENLARLRESQTPLFGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRIGMTPARDGYSFSMTPKGTPLRDELRINEEMDMHESAKLELQRQADLRRSLRSGLGSLPQPRNEYQIVMQPVPEDAEEPEERIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADGDKSSFVPPTSIEQADEMIRRELLALLEHDNAKYPLEEKLSKEKKKGAKRAVNEPAVPVIEDFEEDEMKNADKLIKEEAQYIRITMGHESEPLDEFIEAHRTSLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRNKLDDGKEKIVRLEKKVMVLTQGYETRAKKGLWPQIEATFKQTDIAATELECFEALQKQEQLAASHRINNLRDEVQKQKELERTSQNRYGSLMEELEKIQNIMDQYRVQAQQQEEIEANNRAHESTESVADETVVQDTENSKAVPQSVENGNAIAVDPSHDETTDQQVGTVRDQTTASPKNDMDVDSGSKQMTDDTDGKLSDATPATEDDTGKVEGITTGGYIDNGEATLDEGAAAAAETRSIEGNKEDQDVVMDAANSHDDSTQETTADDDGDKMQVADGNGEGTN* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1632 987 Gene3D - 5 59 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 399 413 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 942 956 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 857 886 - -
Dod06g1632 987 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Dod06g1632 987 Coils Coil 682 716 - -
Dod06g1632 987 Gene3D - 60 114 - -
Dod06g1632 987 Coils Coil 167 187 - -
Dod06g1632 987 SMART sant 58 105 IPR001005 -
Dod06g1632 987 SMART sant 6 55 IPR001005 -
Dod06g1632 987 MobiDBLite consensus disorder prediction 113 150 - -
Dod06g1632 987 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Dod06g1632 987 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Dod06g1632 987 Coils Coil 768 816 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 964 978 - -
Dod06g1632 987 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Dod06g1632 987 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 900 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 380 446 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 831 848 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 213 237 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 269 303 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 887 909 - -
Dod06g1632 987 CDD SANT 10 53 IPR001005 -
Dod06g1632 987 MobiDBLite consensus disorder prediction 510 528 - -
Dod06g1632 987 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Dod06g1632 987 CDD SANT_CDC5_II 55 106 - -
Dod06g1632 987 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Dod06g1632 987 MobiDBLite consensus disorder prediction 811 987 - -
Dod06g1632 987 PANTHER - 1 900 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 222 237 - -
Dod06g1632 987 Pfam Myb-like DNA-binding domain 10 70 - -
Dod06g1632 987 MobiDBLite consensus disorder prediction 478 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1632 Dod-Chr6 22103434 22110665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1632 1 832 MYB-Related Transcription Factor Family AT1G09770 76.555 0.0 1246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g1632 Myb_Cef 6.2e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1632 K12860 - gmx:100790369 1543.87