Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1615 ATGTCAAATCCAAAAGTTTTCTTTGACATTGTAATTGGAAGGATGAAAGCTGGGCGAGTTGTGATGGAACTCTTTGCAGATGTTACTCCCAAAACAGCTGAAAACTTCCGAGCCCTCTGCACTGGTGAAAAGGGTATTGGAAAATCTGGGAAGGCTTTGCACTACAAAGGATCCAAATTCCACCGCATCATTCCTGAGTTCATGTGTCAAGGAGGAGATTTCACCAGAGGGAATGGAACAGGAGGCGAGTCAATTTACGGTGCCAAGTTTTCCGATGAGAATTTCAAGCTGAAGCATACGGGGCCCGGAATTCTTTCCATGGCGAATGCTGGACCAAACACTAATGGTTCTCAGTTCTTTATATGCACCACTAGGACTTCATGGCTTGATGGGAAACATGTTGTGTTTGGGAAAGTTGTTGATGGATATAGTGTTGTGAAGAGGATGGAGGAGGTGGGTTCTGAGGGTGGGAGCACTTCAGAGCCCGTTGTGATAGAAGATTGTGGGCAGTTAACAGAGAATTGA 525 0.4533 MSNPKVFFDIVIGRMKAGRVVMELFADVTPKTAENFRALCTGEKGIGKSGKALHYKGSKFHRIIPEFMCQGGDFTRGNGTGGESIYGAKFSDENFKLKHTGPGILSMANAGPNTNGSQFFICTTRTSWLDGKHVVFGKVVDGYSVVKRMEEVGSEGGSTSEPVVIEDCGQLTEN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1615 174 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 169 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Dod06g1615 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 2 173 - -
Dod06g1615 174 CDD cyclophilin_ABH_like 4 169 - -
Dod06g1615 174 Gene3D - 1 174 IPR029000 -
Dod06g1615 174 SUPERFAMILY Cyclophilin-like 2 171 IPR029000 -
Dod06g1615 174 PIRSF Peptidylpro_ismrse 1 174 IPR024936 GO:0003755
Dod06g1615 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 170 IPR002130 GO:0000413|GO:0003755
Dod06g1615 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1615 Dod-Chr6 21884015 21885909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1615 18 152 U-box Gene Family AT5G67530 49.265 9.07e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1615 K01802 - qsu:111997437 320.472