Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1613 ATGGCGAACCGGTGGTGGACCGCGTCAGTGGGTCTAGGCGACTCATCACCAATGAAAAAACCGGATCTGGGGTTCACCACAAACGACGCCGTTTCACCAGCTTCGAACCATCACAACATAGCAACAGGGGAGCTTCAGCAACAACAATTCGAGGAAGAGGAGAAAGAGAACAGCGACGAGCCCAAGGAAGGCGCGATCGACGTGGCTTCCACGCGCCGCCCCAGGGGGCGGCCACCGGGGTCGAAGAACAAGCCTAAGCCGCCGGTGTTCGTCACACGCGACAGCCCCAACGCGCTCCGGAGCCACGTCATGGAGATTCCCGGCGGAGCCGACATCGTCGACTGCTTCGCGCAATTCGCGAGGCGGCGCCAGCGCGGCGTCTGCATCCTCAGCAGCGCTGGTGCCGTCCTCAACGTCACGCTCCGGCAACCTGCGGCGCCAGGCGCCGTTGTGGCGCTCCACGGCCGGTTCGAGATCCTGTCCTTGACCGGTTCGTTTCTGCCCGGACCTGCCCTGCCCGGGGCCACGGGCTTGACCGTTTACCTCGGCGGAGGGCAGGGACAGGTCCTCGGCGGAGTGGTGGTGGGGCCACTGGTGGCGGCGGGGCCGGTGATGGTGATGGTGGCCACGTTTTCGAACGCTACATACGAGAGGTTGCCCGTAGAGGAGGAGGAGCAGGAAGGGCAGGGACAGGGCGGTGGAGGCGGGTCTCCGCCGGGGATGTGCGGCGGAGGGTCGGTCGGAGATGGGTCATCGTCTGTTGCGGCGGTTTATAATAGTGTTGCTCCGAATTTGGTTGTTCATCAGAATGGGCAGCAAGTGAACCATGAAGGTTACTCTCCATGGGGTCATCATCATGGTCATGGAGGGAGGACACCCTATTAA 885 0.6294 MANRWWTASVGLGDSSPMKKPDLGFTTNDAVSPASNHHNIATGELQQQQFEEEEKENSDEPKEGAIDVASTRRPRGRPPGSKNKPKPPVFVTRDSPNALRSHVMEIPGGADIVDCFAQFARRRQRGVCILSSAGAVLNVTLRQPAAPGAVVALHGRFEILSLTGSFLPGPALPGATGLTVYLGGGQGQVLGGVVVGPLVAAGPVMVMVATFSNATYERLPVEEEEQEGQGQGGGGGSPPGMCGGGSVGDGSSSVAAVYNSVAPNLVVHQNGQQVNHEGYSPWGHHHGHGGRTPY* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1613 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Dod06g1613 294 MobiDBLite consensus disorder prediction 274 294 - -
Dod06g1613 294 CDD DUF296 100 175 IPR005175 -
Dod06g1613 294 MobiDBLite consensus disorder prediction 1 96 - -
Dod06g1613 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 285 IPR014476 GO:0003680
Dod06g1613 294 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Dod06g1613 294 PIRSF ESCAROLA 20 293 IPR014476 GO:0003680
Dod06g1613 294 MobiDBLite consensus disorder prediction 28 47 - -
Dod06g1613 294 Gene3D - 99 227 - -
Dod06g1613 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 225 - -
Dod06g1613 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 16 285 - -
Dod06g1613 294 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1613 Dod-Chr6 21849436 21851054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1613 1 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.455 8.66e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1613 - - gmx:100795097 278.1