Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1610 ATGGTTTGGAAAACTTATGAGACTTTGTTGGTGTTGGCTCTAATGGAAACAGGATTGTCCCTTACTCTTGTGTTGTTGTTGTTGCTGGTTTGTTGTCTTGTTCTGTGTGTTTCTGCCACCGATGTTGAATATGATAACTGTAACTGTGATGATGAGGAAGGGATTCTGAGCATACATAACATACTGGTTAGCCAAAAAGTGGGTGACTTTCTCATCTCCGTTGCATATTTTTCCATCCCCATTGAGATACTTTACTTTGTTAGCCGTTCCAATGTTCCATTCAAGTTGTTGTTCCTTCAGTTTATTGCATTCATAGTTCTATGTGGCTTGACCCATTTTCTCAATGTGTATTCCTATCATGGCCCTCCATCTTTCAAGTTGCTGCTCTCAATCACCATTGCTAAGTTCCTCACTGCCCTTGTCTCTTGCGCAACTGCTTTGACCCTCCCACCACTCATCCCTCTCCTCCTCAAAATCAAGATCAGGGAGCTCTTCTTGAGGCAAAATGTGTTGGAATTGAACCAGGAGGTTGGAATGATGAAGAAGCAAAAGGAAGCGAGTTGCCATGTTCGGATGCTCACGAGGGAGATTAGGAAGACTCTTGATAAGCATACCATCTTGTACACCACCCTTGTTGAGCTTTCAAAGGCACTAGCCTTGCATAATTGCGCGGTTTGGATGCCAGATAAGGAGAGGAATGAAATGAACCTAACCCATGAATTGATAGCAAACCCTGTAAACAGTTTTCGCAATTCAATTCCTAGAAACAACCCGGATGTGTTGGAGATAAAAAAGACTAAGGGGGTGAAGATTCTGAGGCCTGAATCCGTGCTAGGAACCGCAAGTAGTGCTGGCAGTGTGGGGTCGGGCGCTGTGGCAGCTATTCGCATGCCGATACTTCAGGTTTCAAATTTCAAAGGAGGGACGCCACAGATGGTTGAGACATGTTATGCTATACTGGTTTTGGTTCTTCCAAAGTCAGATCGTAGAGTTTGGACCAACCATGAGGTGGAGTTGGTGGAAGTAGTTGCTGACCAGGTAGCAGTAGCCTTGTCTCATGCAGCCATTCTTGAAGAGTCTCATCGAATGAGACAGAAACTGGCAGAGCAAAACCGAGCATTGCAACAGGCTGAAAAGGATGCGATGATGGCCAGCCAGGCAAGGAAGTCATTTCAGAAAGTGATGAGCCATGGAATGCGGAGGCCTATGCATTCAACTCTGGGGCTGCTTTCATTGCTTCAAGAGGATAATATGAGACCTGAGCAGAAGATTATTAGTGACACAATGTTGAAGGTTGGCAGTGTGCTCTCGAGTTTGATTAATGATGTAATGGAGATTTCAGAGAACGAAAAGGGAAGCTTCCAGTTAGAGATGAAACCTTTCCCTCTGCATTCAATGATGAAGGAAGCTGCTTGCATTGCAAAGTGTTTGTGTGTACATAAAGGCTTTGGTTTTGAAATTTGTGTGCAGAAGTCTTTGCCTGATCAGGTTATAGGTGATGAGGAAAGGGCTTTTCAAGTAATTTTGCATATGGTAGGATATTTATTGAATATATATGATGGAGGGAACCTCAATTTTCGAGTTTTGCTTGAAAGTGATAGTGAAGACAAGGATGATAAAATTATTGAGGTATGGAGGGCGAGGAGTCAAAATGAGTATGTAGATATAAAATTTGATTTTCAGATAATTGGTAGTTGTCGGTCAGATGAATCGGTTCCAACCAAACATTATGCTGGTAGGGGTTACTACAACAATGAACTTACAGATGGCCTGAGCTTCAGCATGTGCAAAAAGTTGGTGCAGATGATGCAAGGTAACATCTCAATATCACCGAACTCTCAGGGTTTGGCACAAGGCTTGACGCTGCTTCTGAAGTTTCAGATCGGAACATCACTTGGAAAATCCATATTTGTGCCCAGAGAGTCTTCAAACTCACAGTTCAGAGGCCTCAAGGTTGTGTTAGCTGATGACGACTGTGTAAACAGGATTGTGACCAAGATGCTACTTGAGAAGCTAGGTTGTCAAGTAACCGCTGTTTCATCAGGGTTTGATTGCCTCTGTGCTATAAGTGCCTCCAGTAATGCATTCCGAATCATCCTGTTAGACCTTCACATGCCGGAAATGGATGGTTTCGAAGCAGCGATGAGAATCCGGAGCTTCCAGAGCCATAGCTGGCCCTTGATTGTAGCTCTTATAACTAGTGCAGAAGAACATGAGAAGCAAAAATGCTTACAGGTGGGAATGAATGGTTTTATCCAAAAACCTGTGCTCCTTCATGAGATGGCAGATGAACTTAGAAGAGTCATGCAACGTGCAGGTGGATGA 2325 0.4361 MVWKTYETLLVLALMETGLSLTLVLLLLLVCCLVLCVSATDVEYDNCNCDDEEGILSIHNILVSQKVGDFLISVAYFSIPIEILYFVSRSNVPFKLLFLQFIAFIVLCGLTHFLNVYSYHGPPSFKLLLSITIAKFLTALVSCATALTLPPLIPLLLKIKIRELFLRQNVLELNQEVGMMKKQKEASCHVRMLTREIRKTLDKHTILYTTLVELSKALALHNCAVWMPDKERNEMNLTHELIANPVNSFRNSIPRNNPDVLEIKKTKGVKILRPESVLGTASSAGSVGSGAVAAIRMPILQVSNFKGGTPQMVETCYAILVLVLPKSDRRVWTNHEVELVEVVADQVAVALSHAAILEESHRMRQKLAEQNRALQQAEKDAMMASQARKSFQKVMSHGMRRPMHSTLGLLSLLQEDNMRPEQKIISDTMLKVGSVLSSLINDVMEISENEKGSFQLEMKPFPLHSMMKEAACIAKCLCVHKGFGFEICVQKSLPDQVIGDEERAFQVILHMVGYLLNIYDGGNLNFRVLLESDSEDKDDKIIEVWRARSQNEYVDIKFDFQIIGSCRSDESVPTKHYAGRGYYNNELTDGLSFSMCKKLVQMMQGNISISPNSQGLAQGLTLLLKFQIGTSLGKSIFVPRESSNSQFRGLKVVLADDDCVNRIVTKMLLEKLGCQVTAVSSGFDCLCAISASSNAFRIILLDLHMPEMDGFEAAMRIRSFQSHSWPLIVALITSAEEHEKQKCLQVGMNGFIQKPVLLHEMADELRRVMQRAGG* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1610 774 SMART HisKA_10 387 452 IPR003661 GO:0000155|GO:0007165
Dod06g1610 774 PANTHER TWO-COMPONENT HISTIDINE KINASE 23 769 - -
Dod06g1610 774 SUPERFAMILY GAF domain-like 205 354 - -
Dod06g1610 774 CDD HisKA 385 447 IPR003661 GO:0000155|GO:0007165
Dod06g1610 774 Gene3D - 180 352 IPR029016 -
Dod06g1610 774 ProSiteProfiles Response regulatory domain profile. 651 769 IPR001789 GO:0000160
Dod06g1610 774 Gene3D - 636 772 - -
Dod06g1610 774 CDD HATPase_ETR2_ERS2-EIN4-like 493 624 - -
Dod06g1610 774 Gene3D - 353 450 - -
Dod06g1610 774 Pfam Response regulator receiver domain 652 763 IPR001789 GO:0000160
Dod06g1610 774 Gene3D - 451 630 IPR036890 -
Dod06g1610 774 SUPERFAMILY CheY-like 646 771 IPR011006 -
Dod06g1610 774 PIRSF Ethylen_sen_hybr_HK 20 774 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Dod06g1610 774 PANTHER ETHYLENE RECEPTOR 23 769 - -
Dod06g1610 774 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 372 452 IPR036097 GO:0000155|GO:0007165
Dod06g1610 774 SMART REC_2 650 765 IPR001789 GO:0000160
Dod06g1610 774 CDD REC_ETR-like 650 765 - -
Dod06g1610 774 Pfam GAF domain 204 351 IPR003018 GO:0005515
Dod06g1610 774 Coils Coil 357 387 - -
Dod06g1610 774 ProSiteProfiles Histidine kinase domain profile. 394 630 IPR005467 -
Dod06g1610 774 SMART gaf_1 202 361 IPR003018 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1610 Dod-Chr6 21809105 21813946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1610 41 772 Miscellaneous Gene Families AT3G04580 58.981 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod06g1610 GAF 1.7e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1610 K14509 - gmx:100101892 1138.25