Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1606 ATGGCGTCTTGCTCAGCCACCAACCTCGTCCCACTCCTCGGCGGCATAGCGGCCGCAAACTCAACCGCCGCCGCCAACTACCTCTGCGCCCAGCTCGACGCCATCAACAACAGGCTCACCGATGCAACCAACGCCGTGAACAACACCTACCTTCTCTTCTCCGCGTACCTTGTCTTCGCCATGCAGCTAGGATTCGCCATGCTCTGCGCCGGCTCCGTGCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTCCTACTACCTCTTCGGGTACGCCTTCGCCTTCGGCGCCCCCTCCAACGGCTTCATCGGACGCCACTTCTTCGGCCTCCGCGACTTCCCCTCATCCTCCGGGGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCTGAGCGCACCCAGTTCGTGGCCTACCTCATATACTCCTCCTTCCTCACCGGCTTCGTCTACCCCATCGCCTCCCACTGGTTCTGGTCGTCCGACGGCTGGGCCAGCCCGACCAGAACCAGCGGAAACCTCCTCTTCAAGTCAGGCGCCATCGACTTTGCCGGCTCCGGCGTAGTCCACATGGTCGGCGGTATCGCCGGCCTGTGGGGAGCCTACATCGAAGGGCCACGGATTGGCCGCTTCGACAGAACAGGCCGATCAGTGGCGCTACGAGGCCACAGCGCGTCACTAGTAGTACTCGGTTCGTTCCTGTTATGGTTCGGTTGGTACGGTTTCAACCCAGGTTCGTTTCTCACCATAGCGAAAAGCTACGGTGGAGGTAACACCTATTACGGACAATGGAGCGCCATAGGTAGGACAGCTGTCACCACGACATTGGCCGGCAGCACAGCGGCTCTAACTACCTTGTTCAGTAAACGGTTATTAGTTGGGCACTGGAACGTGATTGACGTGTGTAACGGTCTTCTTGGCGGTTTCGCTGCCATAACGTCCGGTTGTTCCGTTGTGGAGCCCTGGGCTGCGGTAGTGTGCGGGTTCGTGGCGGCGTGGGTGCTGATCGGCCTCAACATGCTGGCGGTGAAAGTGGAGTACGACGACCCGTTGGAGGCGGCGCAGCTCCATGGAGGGTGCGGCGCGTGGGGGGTTCTGTTCACGGGGCTGTTCGCGAGGAAGAGATACGTGGCGGAGGTGTACGGCGCAGGGAGGCAGTACGGGCTGTTCATGGGCGGCGGAGGGAGGTTGTTGGCGGCACAGGTGATCGAGATTCTGGTGGTGAGTGGGTGGGTGACGGCGACGATGGCGCCGTTGTTCTATGGGCTTCATAAGATGAAGCTGTTAAGGATCTCGAACGATGATGAGACCGCGGGGATGGACTTGACGAGGCATGGTGGTTTCGCTTATGCGTACCATGATGAGGATGATGGGGGGTCTGTTAAGCCAACCAAGTTTATGATGGGGAGGATAGAGCCCGCTAGTTTGAGCTCCTCAACGGTGAACACACCAGAGCAGGGTTCACGAGTGTGA 1536 0.6042 MASCSATNLVPLLGGIAAANSTAAANYLCAQLDAINNRLTDATNAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGAPSNGFIGRHFFGLRDFPSSSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIASHWFWSSDGWASPTRTSGNLLFKSGAIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKSYGGGNTYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAVVCGFVAAWVLIGLNMLAVKVEYDDPLEAAQLHGGCGAWGVLFTGLFARKRYVAEVYGAGRQYGLFMGGGGRLLAAQVIEILVVSGWVTATMAPLFYGLHKMKLLRISNDDETAGMDLTRHGGFAYAYHDEDDGGSVKPTKFMMGRIEPASLSSSTVNTPEQGSRV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1606 511 SUPERFAMILY Ammonium transporter 43 452 - -
Dod06g1606 511 PANTHER AMMONIUM TRANSPORTER 3 504 - -
Dod06g1606 511 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dod06g1606 511 PANTHER AMMONIUM TRANSPORTER 3 504 - -
Dod06g1606 511 TIGRFAM amt: ammonium transporter 47 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dod06g1606 511 Pfam Ammonium Transporter Family 50 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dod06g1606 511 Gene3D Ammonium transporter AmtB like domains 24 487 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1606 Dod-Chr6 21762147 21763854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1606 26 504 Inorganic Solute Cotransporters AT1G64780 79.461 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1606 K03320 K07573 gmx:100797209 843.573