Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1589 ATGAATTGCTTCCCGTGTTTTACCTCTCAGAAAAGTAAGAAAAGTCATAGCAAGAAGGACCACGGGGCTACACCACAAGAAAACGTTGTAGCAAAACCACCGGATATGAAGAAACAAAGGCCAGAAGAAGCAAACCAAGTTGACGCAGCAAGCATCAACGCAAAACATTTCACATTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGTCAGGAATGCCTGCTGTGTGAAGCAGGCTTTGGCAGAATCTACAAGGGGATCATTCCTGCAACCGGGCAGGCTGTGGCCGTGAAGCAATTTGACCGAAACGGGATGCATGGCACCAAGGAGTTTCTGGCTGAGGTTTACACGCTGAGCCTCTTGCACCATGAAAATATTGTCAACTTCATTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTTTATGACTATGTTCAAGGGGCTATTCTAGAAGACCATCTTCTTGCGACTGATGCGGATCAACCTCCACTAGATTGGTACACCAGAATGAAAGTGGCAGCTGGTGTTGCTAGAGGACTGGAGTACTTGCATGACAGTGCCAACCCCCCAATAATATTCAAGGACTTGAAACCCTCCAACATATTGCTGGACACAGATCACAATGCAAAGCTATTTGATTTTGGGCTGGCCAATCATTCTACTGGAGACAAGATGAACCCTGCACCTGCAAGGGTTATGGGCACTTATGGTTACTGTGCTCCTGAGTATGTAAGAACGGGTCACCTCACCTTGAAGTCAGATGTGTACAGTTTTGGAGTTGTGTTGCTTGAACTCATAACTGGACGAAGAGCCGTTGACACCACAAGAGCACACGAAGAGCAAAACTTGGTTTCATGGGCACAACCCTTGTTCAGGGACCCCAAGAGGTATCCAGATATGGCAGATCCACTTCTTAATAAAAGGTTCCCCGAGAAGGATCTGAATCAAGCTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGAAGCCCGTCCTTTGATGAGTGACGTAGTAACAGCTTTGAGCTTTCTTTCCATGGTTCATCCAGAGGCTCCTCCTGCACCTCTCCCGCATGCCACCTCGGTCTCTAAGGAGAGTGCTGCCGATCAAGGCCAAAGTGAAAGTGAAATCGAGAGTGGAAATGAGAGCGAATGCAAAAGCCAAAGCGGAAGTGAAAGCGCAAGTTCTTACTCCAGATCATACCGCAGGAGCAGCAGAAGATCAAGGAATGGAGCATATGATTCAGGTTCAGAGTGTGGAAGCGCTTGCTCGAGCTACAGAGGCAGTAGCAAACATCATGGTGAAATAAGCCGGAAGAAGACAGGCAGAAAGTCTTCTTCCAGAGAGTTAAGCCAGAAAAGCAGCAAGAAAACTACTACCAAAGAATTAAGTGAGAAGAGCAGCAAAAAATCTTCTTCAACTGATAAAGAATTGAGCCAGAAGAGCAGCAGAAAATCTTCCATCGGAGGTTTAGGCCACAAGAGCAGTAGGAAATCTTCTGTGAGGGTTTTGAGCCACAAAAGTAGCATGGGTTTTCAAGATGGAAGCTTTTCCATGAGCCGCAACAGCAGCAGCGTTGTTTCGGACGATGAATATGAACGCTGCAGCAGCAGGATGTTATCACGGAGGAACATATCTTTTGGTCTTATCAGCAGTGGCAGTGTTAACAGCAGCAGAAGGAGTGTGGAGGAAGGGAGCATGTGCAGCAGCATGAGATCAGATGAGGGAAGTGGCCACCATTATGACCGTACTAGCAGCAACAGTGGACCACATCGGGGAATTGTTCATTCACGGTGA 1803 0.4709 MNCFPCFTSQKSKKSHSKKDHGATPQENVVAKPPDMKKQRPEEANQVDAASINAKHFTFRELATATKNFRQECLLCEAGFGRIYKGIIPATGQAVAVKQFDRNGMHGTKEFLAEVYTLSLLHHENIVNFIGYCADGDQRLLVYDYVQGAILEDHLLATDADQPPLDWYTRMKVAAGVARGLEYLHDSANPPIIFKDLKPSNILLDTDHNAKLFDFGLANHSTGDKMNPAPARVMGTYGYCAPEYVRTGHLTLKSDVYSFGVVLLELITGRRAVDTTRAHEEQNLVSWAQPLFRDPKRYPDMADPLLNKRFPEKDLNQAVAIAAMCLQEEAEARPLMSDVVTALSFLSMVHPEAPPAPLPHATSVSKESAADQGQSESEIESGNESECKSQSGSESASSYSRSYRRSSRRSRNGAYDSGSECGSACSSYRGSSKHHGEISRKKTGRKSSSRELSQKSSKKTTTKELSEKSSKKSSSTDKELSQKSSRKSSIGGLGHKSSRKSSVRVLSHKSSMGFQDGSFSMSRNSSSVVSDDEYERCSSRMLSRRNISFGLISSGSVNSSRRSVEEGSMCSSMRSDEGSGHHYDRTSSNSGPHRGIVHSR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1589 600 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 584 600 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 412 432 - -
Dod06g1589 600 PANTHER OS07G0668900 PROTEIN 1 487 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 552 600 - -
Dod06g1589 600 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1589 600 MobiDBLite consensus disorder prediction 552 575 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 442 484 - -
Dod06g1589 600 PANTHER RECEPTOR-LIKE KINASE LIP1 1 487 - -
Dod06g1589 600 Pfam Protein kinase domain 79 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1589 600 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1589 600 Gene3D Transferase(Phosphotransferase) domain 1 149 351 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 365 403 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 354 531 - -
Dod06g1589 600 MobiDBLite consensus disorder prediction 504 528 - -
Dod06g1589 600 SUPERFAMILY Protein kinase-like (PK-like) 54 367 IPR011009 -
Dod06g1589 600 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1589 Dod-Chr6 21560135 21564349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1589 1 372 Glycoside Hydrolase AT3G07070 58.779 1.23e-157 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod06g1589 Pkinase 6.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1589 - - gmx:100805544 565.074