Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1588 ATGGAGCAACACTTTGTGGTTCAGCTTCCATTGATGTTCCTTGTTATTGTTCCATGGCTTTTATTGGCTCTCCACCATGCCAATGCTGAAAGCTCAACATACATAGTTCACATGGACAAGACCCTCATGCCTCAAGTCTTTGCTAGTCACAATGATTGGTATGAATCAACTCTTCATTCCATAAAGTTAGCAACAAACACTGGTCAAGCATCAAAGCAGCAACAATCAGAGAATAATTTGGTGTACAAATATAAACATGCCATGCATGGATTCACTGCAGTGCTATCTTCAGATGAGTTGGAGGCCTTGAAGAACACACATGGCTTTGTCACAGCTTACCCTGACAGGCCTGTCACCATAGACACAACTCACACCTTTGAGTTTCTCTCCCTTTACCCTTCCTATGGCCTTTGGAAGGCTTCAAATTTAGGGGAAGGTGTCATTGTTGGTATGGTTGACACAGGTGTGTGGCCTGAGAGTGAGAGCTTCAGAGATGATGGCATGACCAAGAAAATCCCATCAAAATGGAGAGGGACATGTGAGCCAGGACAAGAGTTCAACACCTCCAATTGCAACTTGAAGCTGATTGGTGCAAGGTACTTCAACAAGGGTGTGATTGCAGCAAATCCAAACACCACAATCAGCATGAACTCTGCTAGGGACACATTTGGACATGGTAGCCACACATCATCCACTGTTGGGGGAAACTATGTCAGTGGTGCCTCTTTTTTTGGCTATGCCAAAGGGGTAGCAAGAGGCATTGCACCAAGGGCTAGGCTTGCCATGTACAAGGTTATTTGGGATGAAGGGCGCCAAGCCTCCGATGTTCTTGCTGGGATGGACCAAGCCATTGCTGATGGTGTTGATGTGATTTCCATCTCCATGGGGTTTGATGGTGTCCCACTTTATAAGGACCCTATTGCAATAGCATCTTTTGCAGCAATGGAAAAAGGGGTCTTGGTTTCGTCATCTGCAGGAAATGATGGCCCTGGCCTTGGAACCTTGCACAATGGCATCCCTTGGGTCCTAACTGTGGCAGCAGGCACAATTGACCGCACATTTGGCAGTTTGACACTAGGAAATGGCCAAGCCATCATTGGTTGGACTTTGTTCCCAGCAAAAGCCATAGTGGAGAATTTCAGACTTGTGTATAACAAGTCACTGTCAGCATGCAATTCAGTCCAATTGTTATCACAGGCCACAGAAGGAGGGATCATTATATGTGATGCCTTAAAGTCAGTGTCAGTCTTGGAACAAATCAATGTTGTTACCTTAACCAATAAGCTAGGGGCAGTGTTTATCTCTGATGATCCAAGACTAACTGAAACAGGAAGGGTTCCAACTCCAAGTATTGTAATCAGCACAAGGGATGGACCGTCTGTGATCAATTATGCAACAAGAAGTGGTGACAAGGCCACTGCCAGCATCAAGTTCCAGCAAACATTTGTTGGCATAAAGCCAGCACCAGCTGCAGCATTTTACACTTCAAGGGGTCCTTCACCTAGCTATCCTGAGGTCTTGAAGCCTGATGTGATGGCACCTGGATCCAATGTTCTGGCTGCTTTTGTTCCTAATATACCATCAGCTAGGATTGGCGCAAATGTGTTCCTATCAAGTGACTACAATTTTCTGTCTGGAACATCCATGGCATGCCCTCATGCTTCTGGTGTTGCTGCTCTTCTAAAAGCTGCGCACCCTGAATGGAGTGCTGCTGCCATCAGGTCAGCAATTGTCACCACTGCAAACCCTCTTGACAACACTGAAAGTCCAATTAGGGATAATTGGAATCCATCTCAATATGCTTCACCTTTGGTCATGGGAGCAGGTCAGATTGATCCTAATAGAGCTCTTGATCCAGGTTTGGTATATGATGCCACCCCACAAGATTATGTTAGCCTCCTTTGTGCTTTGGGGTACACAAATGCACAAATCTTGACCATTACTAGATCAAAAGCATATAACTGTGCAGACCCTTCTTTGGATCTTAACTACCCTTCATTTATAGCATTGTATGGTAACAAAACAAGATCAATTGTGAAGAGGTTTAGGAGGACAGTGACCAATGTTGGAGATGGTGCTGCTACATACACAGCCAAGGTGACACATCCTAGGGGCTCTTTGGTCAGAGTGTCGCCAAAGACACTATCATTCAGCAATAAGAATGAGATGCAAAGTTACTTTGTTACCATAAGTTATACAAGGAACAAGAAGGAAAATGTCACATTTGGGGACCTTGTTTGGGTTGAAGAGGGTGGTGCACACAGTGTTAGGAGCCCCATTGTAGTGGCATCAAGAGATATTGTAAAAGTTGTTTGA 2316 0.4491 MEQHFVVQLPLMFLVIVPWLLLALHHANAESSTYIVHMDKTLMPQVFASHNDWYESTLHSIKLATNTGQASKQQQSENNLVYKYKHAMHGFTAVLSSDELEALKNTHGFVTAYPDRPVTIDTTHTFEFLSLYPSYGLWKASNLGEGVIVGMVDTGVWPESESFRDDGMTKKIPSKWRGTCEPGQEFNTSNCNLKLIGARYFNKGVIAANPNTTISMNSARDTFGHGSHTSSTVGGNYVSGASFFGYAKGVARGIAPRARLAMYKVIWDEGRQASDVLAGMDQAIADGVDVISISMGFDGVPLYKDPIAIASFAAMEKGVLVSSSAGNDGPGLGTLHNGIPWVLTVAAGTIDRTFGSLTLGNGQAIIGWTLFPAKAIVENFRLVYNKSLSACNSVQLLSQATEGGIIICDALKSVSVLEQINVVTLTNKLGAVFISDDPRLTETGRVPTPSIVISTRDGPSVINYATRSGDKATASIKFQQTFVGIKPAPAAAFYTSRGPSPSYPEVLKPDVMAPGSNVLAAFVPNIPSARIGANVFLSSDYNFLSGTSMACPHASGVAALLKAAHPEWSAAAIRSAIVTTANPLDNTESPIRDNWNPSQYASPLVMGAGQIDPNRALDPGLVYDATPQDYVSLLCALGYTNAQILTITRSKAYNCADPSLDLNYPSFIALYGNKTRSIVKRFRRTVTNVGDGAATYTAKVTHPRGSLVRVSPKTLSFSNKNEMQSYFVTISYTRNKKENVTFGDLVWVEEGGAHSVRSPIVVASRDIVKVV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1588 771 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Dod06g1588 771 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Dod06g1588 771 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Dod06g1588 771 CDD PA_subtilisin_like 356 476 - -
Dod06g1588 771 Pfam Subtilase family 144 584 IPR000209 GO:0006508|GO:0008236
Dod06g1588 771 Gene3D - 634 765 - -
Dod06g1588 771 ProSiteProfiles Serine proteases, subtilase domain profile. 123 617 - -
Dod06g1588 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Dod06g1588 771 Pfam Peptidase inhibitor I9 33 120 IPR010259 -
Dod06g1588 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 120 IPR037045 -
Dod06g1588 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 763 IPR045051 -
Dod06g1588 771 CDD Peptidases_S8_3 118 582 IPR034197 -
Dod06g1588 771 Gene3D Peptidase S8/S53 domain 146 630 IPR036852 GO:0004252|GO:0006508
Dod06g1588 771 SUPERFAMILY Subtilisin-like 122 621 IPR036852 GO:0004252|GO:0006508
Dod06g1588 771 Pfam Fibronectin type-III domain 661 762 IPR041469 -
Dod06g1588 771 Gene3D - 351 483 - -
Dod06g1588 771 PANTHER OS01G0868800 PROTEIN 33 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1588 Dod-Chr6 21451258 21453803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1588 12 764 Subtilisin-like Serine Gene Family AT5G67090 41.580 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1588 - - gmx:100806072 1189.1