LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod06g1581	ATGTTCAAATTCCTGAAAGAGGTCGTGGGTGGATCTGGAACTGGCGTGAAGGATCTCCCTTACAACATCGGCGAACCTTATCCTTCCGCCTGGGGTTCATGGGTTCACCACCGCGGCACCTCTAAGGATGATGGGTCTCCAGTTTCAATCTTTTCTCTTACCGGGAGCAGTGCTCAGGACGGGCATTTAGCTGCGGGTCGAAATGGCGTCAAGCGTCTCCGCACTGTTAGGCATCCGAATATCTTGTCGTTTCTTCACAGTACTGAGATCGAAACCCATGACGGTGGTTCCCCCAAGGTTACAATTTATATTGTGACTGAGCCTGTTATGCCACTGTCAGACAAGATTAAGGAGTTAGGCCTTGAAGGTACACAAAGGGATGAATATTATGCCTGGGGCCTTCATCAAGTAGCTAAAGCTGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGTAATGTTTGTTTGGCTAGTGTTGTTGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTCGATGGGAGTAATGAAACTTCCTCTGGCTCAATGCTGCAATATGCATGGCTTGTTGGGTCACAATACAAGCCAATGGAGCTGGCAAAATCTGACTGGGCTGCAATTAAGAAGTCTCCTCCGTGGGCCATTGATTCTTGGGGCATGGGTTGTCTAATTTATGAGCTATTCTCCGGCACGAAGTTGGGAAAAACAGAAGATTTACGCAACACAGTCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGTTACTGAGTTCCATGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAATATTTTCAAAATAAGCTGGTAGACACAATACATTTCATGGAAATTCTGAGTTTGAAGGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTTCCAAATCTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTGAAGAAATTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCACTGTTGAAAATGGGTTTGTGGCTTTCAGCTGAGGATTTCCGACTCAAGGTGCTTCCAACAATTGTTAAACTTTTTGCCTCTAATGACCGAGCTATTCGAGTTGCCCTTCTTCAACATATTGATCAATATGGAGAGTCATTATCAGCACAAGTTATTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGATACATCTGCTTTTCTGAGGGAGCTGACTCTCAAATCCATGCTAATTCTGGCTCCGAAGCTGTCTCAGAGGACCATTTCAGGGTCGCTATTAAAGCACCTATCAAAGTTGCAGGTTGATGAAGAACCGGCTATACGAACAAATACTACCATCTTATTGGGAAATATTGCAAGCCACTTAAATGAAGGGACAAGAAAAAGAGTCTTGATTAATGCATTCACAGTTCGTGCTTTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCTACCAGTTCCTACTATGACATCACTGAAGTTGCGACCCGTATCCTTCCAAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCGTTTCAAGCTGTTGATCAATTTTTACTGATAGCGAAGCAACATTATGAGAAGACAAATGCAGCAGACACTACTGGGGGTGTGGGCATGGGAACCTCATCTATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGTAAACCTTCTGATCATGCTCCAGTAGCTTCTGCAAGTTCTAGTGCACTTACTCCAATATCTTCTAATGATGCCAGCTCAGCTGTAGATACACCATCAACAGCACCGGCTCGCGTAAGCTCCATAACAGATTTTGCTGAACAGCCTGCTCCTCCATCCCCTACATCAACGGATGGCTGGGGGGAACTAGATAATGGAATTGATGAGGAGCATGAAAATGACAAAGATGGGTGGGATGATCTGGAACCACTTGAAGAGCCAAAGCCAACTCCAGCTCTTGCAAACATTCAAGCTGCTCAAAGGCGGCCAGTTTCTCAACCTGTTTTACAGACAAAACAAGCCTCAAGTTTGCGATCCAAAAGTACACCAAAGTTGAATGAAGATGATGATTTGTGGGGTTCCATAGCAGCTCCTGCTCCAAAAACAGCAAAACCTTTAAATTTGAAATCAAGTGGAACTGATGATGATGATCCCTGGGCTGCTATTGCTGCTCCTGCACCCACTACCAAGGTCAAGCCCTTGTCAGCTGGCCGGGGTCGGGGAGCTAAACCGGCTGCTCCAAAATTAGGTGCACAGCGGATAAACCGGACATCGTCCGGGATGTAA	2385	0.4507	MFKFLKEVVGGSGTGVKDLPYNIGEPYPSAWGSWVHHRGTSKDDGSPVSIFSLTGSSAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETHDGGSPKVTIYIVTEPVMPLSDKIKELGLEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSGSMLQYAWLVGSQYKPMELAKSDWAAIKKSPPWAIDSWGMGCLIYELFSGTKLGKTEDLRNTVSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGLWLSAEDFRLKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQVIDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTISGSLLKHLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRSKAFQAVDQFLLIAKQHYEKTNAADTTGGVGMGTSSIPGNASLLGWAMSSLTLKGKPSDHAPVASASSSALTPISSNDASSAVDTPSTAPARVSSITDFAEQPAPPSPTSTDGWGELDNGIDEEHENDKDGWDDLEPLEEPKPTPALANIQAAQRRPVSQPVLQTKQASSLRSKSTPKLNEDDDLWGSIAAPAPKTAKPLNLKSSGTDDDDPWAAIAAPAPTTKVKPLSAGRGRGAKPAAPKLGAQRINRTSSGM*	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod06g1581	794	Gene3D	-	282	560	IPR011989	-
	Dod06g1581	794	MobiDBLite	consensus disorder prediction	594	794	-	-
	Dod06g1581	794	MobiDBLite	consensus disorder prediction	657	679	-	-
	Dod06g1581	794	ProSiteProfiles	Protein kinase domain profile.	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod06g1581	794	Gene3D	Transferase(Phosphotransferase) domain 1	110	279	-	-
	Dod06g1581	794	SUPERFAMILY	ARM repeat	293	552	IPR016024	-
	Dod06g1581	794	Gene3D	Phosphorylase Kinase; domain 1	12	107	-	-
	Dod06g1581	794	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	1	792	-	-
	Dod06g1581	794	PANTHER	-	1	792	-	-
	Dod06g1581	794	SUPERFAMILY	Protein kinase-like (PK-like)	38	286	IPR011009	-
	Dod06g1581	794	MobiDBLite	consensus disorder prediction	692	714	-	-
	Dod06g1581	794	MobiDBLite	consensus disorder prediction	601	653	-	-
	Dod06g1581	794	ProSiteProfiles	HEAT repeat profile.	366	404	IPR021133	-
	Dod06g1581	794	SMART	serkin_6	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod06g1581	70	291	MAP Kinase Kinase Kinase	AT5G66850	25.630	1.93e-06	49.7

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL1	Dod06g1581		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod06g1581	K08876		-	gmx:100782748	1372.84