Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1575 ATGGGACTAAAGATACCACTTACCAGCACGAAGTTGAAGAAGCTAGAAAGATCACACAAGGCTTTGATGAAGATGGCGGAAGTAGAGGACGTTGAAGACGACGACGACGACGACGACGTCGTTTTGGTTGCCCCACCAAACTTCTCAATGGTTGAAGAAGGAGTTTACCGCTCCAGCTTCCCTCAGCCTTCAAATTTTGCTTTTCTCCAAACCTTAAATCTCCGATCCATCACTGTAATTATTGCTCAACCATACTTGTGCCCCGAACCGTATCCACAAGAGAATCTGGAGTTTCTTCAATCACATAATATTCAACTCTTTCACTTTGGCATTGAGGGCAAAACGGATCTGTCTGTGTCAACTATCAAAGATACTATCATGGAGTCCGTGAAAGTTTTAATTGATGTTAGAAATCACCCAGTTTTGATACACTGCAATCGTGGAAAGCATCGAACTGGTTGCATTGTTGGTTGCCTGAGGAAATTGCAGAATTGGTGTTTGGGTTCTGTGTGTGAGGAGTACCAACGATTTGCTGGTGCTAAATCAAGGAACACAGATTTGAGATTCATAGAAACGTTTGACATCACAAGCCTGAGGCAGTGCCTTTACAGCACCATCTACCAATACCAAGGATATGCCTCAAAGAAGCCACGGTTGTTGTTTGGATCACAAGACAAGATACAAAAGCCCCAATTGACATCAGTTTAG 708 0.4322 MGLKIPLTSTKLKKLERSHKALMKMAEVEDVEDDDDDDDVVLVAPPNFSMVEEGVYRSSFPQPSNFAFLQTLNLRSITVIIAQPYLCPEPYPQENLEFLQSHNIQLFHFGIEGKTDLSVSTIKDTIMESVKVLIDVRNHPVLIHCNRGKHRTGCIVGCLRKLQNWCLGSVCEEYQRFAGAKSRNTDLRFIETFDITSLRQCLYSTIYQYQGYASKKPRLLFGSQDKIQKPQLTSV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1575 235 Gene3D Protein tyrosine phosphatase superfamily 41 197 IPR029021 -
Dod06g1575 235 ProSiteProfiles Dual specificity protein phosphatase domain profile. 47 204 IPR020422 GO:0006470|GO:0008138
Dod06g1575 235 Pfam Tyrosine phosphatase family 42 198 IPR004861 -
Dod06g1575 235 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 37 216 - -
Dod06g1575 235 ProSitePatterns Tyrosine specific protein phosphatases active site. 143 153 IPR016130 GO:0016311|GO:0016791
Dod06g1575 235 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
Dod06g1575 235 PRINTS Plant and fungal dual specificity phosphatase signature 42 59 IPR020428 GO:0016791
Dod06g1575 235 PANTHER TYROSINE-PROTEIN PHOSPHATASE 37 216 - -
Dod06g1575 235 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 194 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1575 Dod-Chr6 21274830 21276514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1575 31 235 Protein tyrosine phosphatase (PTP) family AT3G02800 61.650 2.50e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1575 K18045 - gmx:100808199 303.908