Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1573 ATGGTAGGCCAGCACAACTTACTATTGAGCTTAGCTCTATCATCCCTTTGCATGGTTTTGAGCCCTAATTGGATCTCCATTGAAGCTGCCCCTCCAACCTCTCTTATCACACAACTCCCTGGCTTTACCGGCATTTTCCCATCAAAGCACTACTCCGGATATATAAGCATTGATGGAAATGTTGAGAGTGGGAAGAACCTGTTCTACTACTTTGTAAGCTCCGAAAGAAATCCAGCGAAGGATCCGGTTGTTTTGTGGTTGAATGGTGGACCTGGGTGCTCCAGCTTCGATGGCTTCGTTTATGAACATGGGCCATTCAACTTTGAAGCCGCAAAAGGGAAAGGGAATCTGCCCACCTTGCATATCAATCCGTACAGCTGGTCTAAGGTTTCAAACATTATTTATTTGGATTCTCCCGCGGGTGTTGGGTTGTCTTACTCCAAGAACTCCAGCAAATACACTACGGGGGACTTGCAAACTGCGGCTGATACCCATGCATTCCTCTTAAAGTGGTTCGAGCAATTCCCTGAATTCCTTGATAATCCATTTTACATTGCTGGGGAATCCTACGCTGGAGTATATGTGCCCACTCTGGCTTATGAAGTGGTTAAAGGAATCAAGGGTGGTATTAAGCCCGTGATCAATTTCAAGGGTTACATGGTTGGAAATGGCGTCACGGACCAAACATTTGACAGCAATGCTTTCATCCCATTTGTGCATGGGATGGGCCTCATATCCGACGATATATATGAGGAAGTACAAGCATATTGCAAAGGAAATCACAACAATTATGATTCCGAAGGTGACGATAATAATTTGTGCTCCAAGAGCTACATAAAAGTTGACAGGGCCATTGATGGGCTAAACATATACAATATACTAGAACCATGCTACCATGACCCTAATACAACTGCCAAAGGAAATGTGAGCTTGCCATTGAGCTTCAAGCAATTAGGGGCAACAGATAAGCCTCTCCCTGTGAGAAAGAGAATGTTTGGTCGAGCATGGCCCCTTGGAGCAGCAGTCAAAGACGGACCCGTTACACTGTGGCCCCAATTGGCTGAAGATGACCATATTCCATGTATCAGTGATGAAGTAGCAAATTCATGGCTAAACAACGATGAAGTCAGGAAAGCCATTCATGCTGAGCGTATGAGTGTGGCGGGTCCGTGGGTACTATGCACTGGAAGAATAAGTTACAGTCACGATGCCGGAAGCATGATTCCTTACCACAGGAACCTAACCATGCTGGGCTATCGAGCACTTATTTTCAGTGGGGACCATGATTTGTGCGTGCCATATACCGGAAGTGAGGCGTGGACTCGATCTCTGGGATATAAGATTTTGGATGAATGGAGGCCCTGGATCTCTAATAGTCAAGTTGCTGGGTACTTGCAAGCATACGATAACAACCTCATCTTCCTTACCGTCAAGGGAGCTGGACACACAGTGCCAGAATATAAGCCACAGGAGGCACTGGATTTTTACATCAGGTGGTTGGAAGGAAAACCAATATAA 1518 0.4565 MVGQHNLLLSLALSSLCMVLSPNWISIEAAPPTSLITQLPGFTGIFPSKHYSGYISIDGNVESGKNLFYYFVSSERNPAKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKGKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNSSKYTTGDLQTAADTHAFLLKWFEQFPEFLDNPFYIAGESYAGVYVPTLAYEVVKGIKGGIKPVINFKGYMVGNGVTDQTFDSNAFIPFVHGMGLISDDIYEEVQAYCKGNHNNYDSEGDDNNLCSKSYIKVDRAIDGLNIYNILEPCYHDPNTTAKGNVSLPLSFKQLGATDKPLPVRKRMFGRAWPLGAAVKDGPVTLWPQLAEDDHIPCISDEVANSWLNNDEVRKAIHAERMSVAGPWVLCTGRISYSHDAGSMIPYHRNLTMLGYRALIFSGDHDLCVPYTGSEAWTRSLGYKILDEWRPWISNSQVAGYLQAYDNNLIFLTVKGAGHTVPEYKPQEALDFYIRWLEGKPI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1573 505 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 504 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Dod06g1573 505 Pfam Serine carboxypeptidase 40 502 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 472 485 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Dod06g1573 505 ProSitePatterns Serine carboxypeptidases, histidine active site. 472 489 IPR033124 GO:0004185
Dod06g1573 505 Gene3D - 407 502 - -
Dod06g1573 505 Gene3D alpha/beta hydrolase 29 322 IPR029058 -
Dod06g1573 505 SUPERFAMILY alpha/beta-Hydrolases 36 504 IPR029058 -
Dod06g1573 505 PANTHER CARBOXYPEPTIDASE 22 504 - -
Dod06g1573 505 Gene3D - 361 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1573 Dod-Chr6 21240160 21254308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1573 366 505 Calmodulin-binding Proteins AT2G22960 47.857 1.60e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1573 K16296 - gmx:100781451 824.313