Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1550 ATGGGCTCTTCTTCTAGAACCTTCTCGGCGAACCCGCGCGACTACAAGCTTCTAGAAGAAGTCGGTTACGGCGCCAGCGCTACCGTCTACCGCGCAGTCCACCTCCCTTCCAACGAACAAGTGGCCGTTAAGAGCCTGGATCTGGACCGTTGCAACAGCAACCTCGAAAACATCAGGAAGGAGGCGCAGACCATGAGCCTGATCGACCACCCCAACGTTTTACGCGCCTTCTGCTCCTTCGTTGTTGACCGAGGCCTGTGGGTCGTGATGCCGTTCATGGACCAGGGCTCATGCCTCCACCTCATGAAAGTCGCGTACTCTGATGGGTTCGAAGAGCCCGCGATTGGATCCATACTTAAGGAGACTCTCAAGGCTTTGGAGTATCTTCATAGCCATGGGCACATTCATCGTGATGTGAAGGCTGGGAATATCTTGCTTGATTCCAATGGGGATGTTAAGCTCGCGGATTTCGGTGTGTCGGCTTGCTTGTTTGATGCTGGGGATAGGCAGCGGTCCAGGAATACCTTTGTCGGAACGCCTTGCTGGATGGCACCGGAGGTGTTGCAGCCTGGAACTGGCTACAATTTCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTGGAGCTGGCTCATGGTCATGCGCCTTTCTCGAAATATCCTCCTATGAAGGTTCTGCTAATGACCATACAGAATGCCCCTCCAGGGCTTGATTATGATCGGGATAGGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCCGACAAAGAGGCCGACAGTGGAGAAGTTATTGAAACACTCTTTCTTCAAACAAGCCAAGCCTCCTGAGCTTTCCGTAAAGAAATTATTTGATGATTTACCACCTCTCTGGAACCGTGTGAAAGCCCTCCAGCTTAAAGATGCTGCTCAACTAGCACTAAAGAGAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATACAAGCGAGGAGTTAGTGCATGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTTGAAGACAATGATATTTCAGAGATAAGGGAAGAAGATGAAAACAAATTTGTCAGCGGGTACAAGGATTCAACTGATTCCCGGCTTAGTATAGACAAAAAGAATTCAGATAACTTGCAACAAGATGAGGTCACATTAGAAGTAGGTGGTAATGAAACAATACTGAGTGAGAAGAGAAATGGATCAGTTGCTGAGGCAACGCCATCTACCTTAGAGAAGGATACTGGAACAAGCAAGATTAAAGCTCAATCAGGGAGAATCCGTAAAACCCAGAGTGGGCCGCTAGTTCCAGATAGAGTGCTTGGTCATTCTTTACCCGAAAGAGGGCCTACATTTGAAAGGCTTGAGAACGAAAACCAGTTATCAGGTGAGAAAATTAATCGTGATGGACGACGAGCTCCGAACTTTAGTGGCCCATTGATGCTTCCAAACCGAGCTTCCGCAAATAGTTTATCAGCTCCAATAAAATCTTCAGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGCCGATTCTCAGTGACATCAGAGAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCTCAGGGATCACCTCTAAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTCCAAACAAATGCCAATTGGGCAGTCCTCTAAAGATTCTGTAAATGTCAATATTTCTCCTTCGCTTCTGATTCCTCACCTTCAAAATCTTTTCCATCAGACATCTATTCAACAGGATCTTATAATGAATCTTGTGAATAGCTTGCAACCTGCTGAGGCAATTGATGCTTCTCAAAATGGAAAGTTACCACCATTACCTCGCACTTCAGAGAACAATGGAACTATGGATATGGCAGCTTCAGAGAGGGAACAACTGCTTCTGCTCAAAATTTCAGAACTTCAGGCTCGGATGGTGAATTTGACCGAAGAACTGAATTCTGAGAAGTTAAAATACCAGCAGTTGCAACAACAGCTAAATGCTCTCTACGGCCAGGAACAAAATGGGAAAAGAGAGGAAGTTGCATGA 2112 0.456 MGSSSRTFSANPRDYKLLEEVGYGASATVYRAVHLPSNEQVAVKSLDLDRCNSNLENIRKEAQTMSLIDHPNVLRAFCSFVVDRGLWVVMPFMDQGSCLHLMKVAYSDGFEEPAIGSILKETLKALEYLHSHGHIHRDVKAGNILLDSNGDVKLADFGVSACLFDAGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDPTKRPTVEKLLKHSFFKQAKPPELSVKKLFDDLPPLWNRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDIDDLKAQASLVEDNDISEIREEDENKFVSGYKDSTDSRLSIDKKNSDNLQQDEVTLEVGGNETILSEKRNGSVAEATPSTLEKDTGTSKIKAQSGRIRKTQSGPLVPDRVLGHSLPERGPTFERLENENQLSGEKINRDGRRAPNFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMLDSKQMPIGQSSKDSVNVNISPSLLIPHLQNLFHQTSIQQDLIMNLVNSLQPAEAIDASQNGKLPPLPRTSENNGTMDMAASEREQLLLLKISELQARMVNLTEELNSEKLKYQQLQQQLNALYGQEQNGKREEVA* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1550 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Dod06g1550 703 CDD STKc_OSR1_SPAK 14 276 - -
Dod06g1550 703 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Dod06g1550 703 SUPERFAMILY Protein kinase-like (PK-like) 13 326 IPR011009 -
Dod06g1550 703 MobiDBLite consensus disorder prediction 407 439 - -
Dod06g1550 703 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1550 703 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1550 703 Coils Coil 652 700 - -
Dod06g1550 703 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 696 - -
Dod06g1550 703 MobiDBLite consensus disorder prediction 407 459 - -
Dod06g1550 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 696 - -
Dod06g1550 703 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1550 703 Gene3D Transferase(Phosphotransferase) domain 1 96 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1550 Dod-Chr6 20827411 20835634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1550 8 695 MAP Kinase Kinase Kinase Kinase AT4G10730 67.288 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dod06g1550 Pkinase 9.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1550 - - gmx:100783699 1152.5