Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1538 ATGTACTTGAACCTCAACATAATAAGCTTTTGCCATGTGGTCTTGTCGTTTGTGTCACTGACCATGGTATTTTGTCATGAATTGAAGAATTACTATCCAGAAGAAAGGGATGCTTTGTTGCTAATAAGGGATTCTTTAAGTTCGTCTTCCAAATTGCATGGCAGTTGGACTGGCTCTCCTTGTATAGGCAATCAAAGTAGATGGAGAGGTATCACTTGTTCAAATTGGCATGTTATCAACATAGTCCTAGAAGGGGTCAACCTTTATGGCTCTTTGCCTTCTACATTCCTGCAAAACATAACTTTCTTGAAGCAACTTAACTTTAGAAACAATTCAATTTTTGGGTTGCTGCCTAACCTCACAAATTTGGTGTTCTTGGAAAAAGTTTCACTATCATATAATCATTTCTCAGGGTCAATTCCTTTGGAATATGCTGGATTGCCTAATCTGAAAGTGTTGGAGTTGGAAGAGAATTACTTGGATGGCCAAATTCCACCCTTTGATCAACCATCACTGACAAGTTTCAATGTGTCATATAATCATTTGATGGGGCCAATTCCTGAAACTTCAACCCTGCAAAGGTTCCCAGATAGCTCCTTTGGTAATAATTTAGGTCTTTGTGGGAAGCCATTGGATAAGTTATGTCCTGCACCACCTCCTTCTATAATTCCTTCAAGGCCTGCAGTGGAGAAACATAACCATATATTCAAAGTAAGGATGATTGTTTTGATTGCTGCTGCAGCTGCACTTGTGCTTCTTCTTATTATAACTGCTTTCTTGGCCTATAATAAAGGAGTTCGTGCAACAAAAGAAACAACAAAAAATGATGCAGCAGAATTTCCAGCTTTTGACATGGATGATTTATTAAGGGCATCAGGAGAAATGCTAGGGAGTGGAAACTTTGGCATTACATATAAAGCAACCCTGGAAACTGGCACTGTTGTTGCAGTAAAGAGACTCAGTCACATGAATGAATTGAACAGGAGAGAATTTCTCAAGCAGATGCAATTGCTAGGGAAGATGAAGCATGAGAATCTAGTAGAAATTATCTCCTTTTATCATTCAGAGGAGCAAAAGCTGGTCATATATGAGTTCATCTCAAGTGGCACTCTATTTGAGCTCCTTCATGAGAGTAGAGGAGTTGGTAGAATACCCCTTGATTGGAATGCAAGACTGACTATTGTCAAAGACATAGCAAAGGGTGTTGCTTTCCTTCACCATTCTTTGTCATCTCACAAGGTCCCTCATGCCAACCTCAAATCATCCAATGTCCTAATTCAACATGATAGCCATGGTTACCATTCAAAACTCACAGACTTTGGCTTCTTGCCTCTACTTCCTGCCAGGAAATTGCAAGAGAAGCTAGCCATAAGCAAGTCACCAGAATTTGTTCAAGGGAAGAAGCTGACACACAAGGCTGATGTGTATTGCCTTGGAATCATTATGCTAGAGGTTATAACTGGGAAAATTCCTGGTGAGATGGTGGGGGAAATGGAAGAAACCACCAGTGATCTTTCAGATTGGGTGAGAATGGTGGTGAACAATGACTGGTCCACAGATATACTGGATGTGGAGATACTGGCAGCAAAAGAAGGTCATGATTCAATGTTCAAGCTAACAGAGATAGCTCTAGAGTGTACTGATGAGAAACCAGAGAAGAGGCCTAAAATAAGTGAAGTGTTGACCCTAGGTGTTTCCTTAAATAAGGAAATTCTTGTGACCATTGCAAAGCTGGTGACAACTGGTGCAAGCTCCTTACTTCAAATTCCATGA 1773 0.4027 MYLNLNIISFCHVVLSFVSLTMVFCHELKNYYPEERDALLLIRDSLSSSSKLHGSWTGSPCIGNQSRWRGITCSNWHVINIVLEGVNLYGSLPSTFLQNITFLKQLNFRNNSIFGLLPNLTNLVFLEKVSLSYNHFSGSIPLEYAGLPNLKVLELEENYLDGQIPPFDQPSLTSFNVSYNHLMGPIPETSTLQRFPDSSFGNNLGLCGKPLDKLCPAPPPSIIPSRPAVEKHNHIFKVRMIVLIAAAAALVLLLIITAFLAYNKGVRATKETTKNDAAEFPAFDMDDLLRASGEMLGSGNFGITYKATLETGTVVAVKRLSHMNELNRREFLKQMQLLGKMKHENLVEIISFYHSEEQKLVIYEFISSGTLFELLHESRGVGRIPLDWNARLTIVKDIAKGVAFLHHSLSSHKVPHANLKSSNVLIQHDSHGYHSKLTDFGFLPLLPARKLQEKLAISKSPEFVQGKKLTHKADVYCLGIIMLEVITGKIPGEMVGEMEETTSDLSDWVRMVVNNDWSTDILDVEILAAKEGHDSMFKLTEIALECTDEKPEKRPKISEVLTLGVSLNKEILVTIAKLVTTGASSLLQIP* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1538 590 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Dod06g1538 590 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 562 - -
Dod06g1538 590 Gene3D Phosphorylase Kinase; domain 1 262 365 - -
Dod06g1538 590 Gene3D Transferase(Phosphotransferase) domain 1 366 574 - -
Dod06g1538 590 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 13 562 - -
Dod06g1538 590 SUPERFAMILY L domain-like 32 195 - -
Dod06g1538 590 Pfam Protein kinase domain 293 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1538 590 Gene3D Ribonuclease Inhibitor 32 217 IPR032675 -
Dod06g1538 590 SUPERFAMILY Protein kinase-like (PK-like) 293 562 IPR011009 -
Dod06g1538 590 ProSiteProfiles Protein kinase domain profile. 290 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1538 590 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1538 Dod-Chr6 20710309 20715496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1538 35 563 Receptor kinase-like Gene Family AT1G68400 33.550 1.87e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod06g1538 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1538 - - gmx:102668068 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1538 06 20710309 20715496 Dod06g1538 06 20710309 20715496 ECH