Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1537 ATGGCAACAAGAAGATCATATGCTTTTGGAAGGGTGGATGAGGCTACCCACCCTGACTCCATCAGAGCCACCTTAGCTGAATTTGTCTCCACTCTTATCTTTGTTTTTGCTGGAGAAGGCTCCATGCTTGCTCTCAGCAAGATTTACAAGGTTCCAGGTGCATCAGCAGGGGAGCTAGTGGCAATTGCACTAGCACATGCCTTTGCTCTATTTGCTGCTATATCTGCTAGCATGCATGTATCCGGTGGCCATGTCAACCCTGCAGTTACTTTCGGTGTTCTTCTTGGTGGTAGGATCTCTGTCCTTAGGGCTGTCTACTACTGGATTGGTCAACTTCTGGGTTCTGTAGTGGCGGCACTCTTATTGAGGCTTGTCACTAACAACATGAGACCGTCTGGGTTGAGTGTGACAGTGGGTCTTGGAGCGGGACACGGCCTTATACTTGAGATTGCCATGACATTTGGTCTCATGTACACTGTCTATGCCACTGCCATTGATCCCAAAAGGGGCAACATTGGCACCATTGCACCCTTGGCCATTGGGCTCATTGTTGGGGCAAACATCCTTGTTGGCGGGCCCTTTGATGGGGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTTCCTTAGTGGGCTGGAGATGGCACTACCACTGGGTCTTCTGGCTGGGCCCATTGATTGGTGCTGCCCTGGCTGCACTCATCTATGAATATGCTGTCATCCCAACTGAGCATCCTCCTCATCACCCTCATCCTCACCCTCCCCCTCCCCCTCATGGACTTCACCAGCCTCTGGCTCCTCAAGATTACTAG 810 0.5173 MATRRSYAFGRVDEATHPDSIRATLAEFVSTLIFVFAGEGSMLALSKIYKVPGASAGELVAIALAHAFALFAAISASMHVSGGHVNPAVTFGVLLGGRISVLRAVYYWIGQLLGSVVAALLLRLVTNNMRPSGLSVTVGLGAGHGLILEIAMTFGLMYTVYATAIDPKRGNIGTIAPLAIGLIVGANILVGGPFDGACMNPARAFGPSLVGWRWHYHWVFWLGPLIGAALAALIYEYAVIPTEHPPHHPHPHPPPPPHGLHQPLAPQDY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1537 269 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Dod06g1537 269 SUPERFAMILY Aquaporin-like 14 248 IPR023271 -
Dod06g1537 269 TIGRFAM MIP: MIP family channel proteins 26 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 5 269 - -
Dod06g1537 269 Pfam Major intrinsic protein 15 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 Gene3D Glycerol uptake facilitator protein. 5 245 IPR023271 -
Dod06g1537 269 MobiDBLite consensus disorder prediction 245 269 - -
Dod06g1537 269 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PRINTS Major intrinsic protein family signature 181 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g1537 269 PANTHER AQUAPORIN-8 5 269 IPR034294 -
Dod06g1537 269 CDD MIP 22 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1537 Dod-Chr6 20701612 20704099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1537 1 269 Major Intrinsic Protein MIP AT1G73190 68.478 5.08e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1537 K09873 - gmx:100814469 401.749