Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1528 ATGAGGGACTCATCTGAGGCAAAGCATGTGGCCATGGAGATAGAGGCAAGCAAGCCTTCTTCAGTGGGAGCATTGCCAGGTCTGAGCCCTCTGAGTGAGACCCTTTGGAGGGAGAAGGCAAACACAGAATTCATTGGTGATGTTTCAGCAAGGCTCACTTGGAAGGACCTCACTGTTATGGTCACTCTAAGCAATGGAGAGACCCAGAATGTTCTTGAAGGCCTAACTGGTTATGCTGAGCCTGGAACCTTCACTGCTGTCATGGGACCATCTGGTTCTGGCAAGTCCACCCTCCTTGATGCACTGTCTAGTCGGTTAGCAGCAAATGCTTTCCTCTCAGGGACCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTTGGCACTGCGGCATATGTGACACAAGACGACAACTTGATTGGAACACTAACGGTACGAGAAACGATCTCTTATTCAGCACGCCTGCGGCTGCCTGACAAGATGCCATGGTCAGACAAGCAAGCTCTTGTTGAGAGCACCATTGTGGCGATGGGCCTTCAGGATTGTGCTGACACTGTGATTGGAAACTGGCACTTGCGTGGGATCAGTGGTGGAGAGAAGAGAAGGGTTAGCATTGCCTTGGAAATCTTGATGAGGCCTAGGTTGCTTTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTACGTGCCTTGGCAAGGGATGGACGAACAGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACTTGCTTTCTGGCGGCAAGACTTTCTTTGCACAAGCTGGATTTCCATGCCCTGCCTTGAGGAACCCATCAGATCATTTCCTTAGGTGCATCAATTCTGACTTTGACAAGGTCAAGACTACTCTTAAAGGGTCCATGAAGCTAAGGTTTGAGGGAAGTGAAGATCCCTTGGACAAGATCACTACTTTTGAAGCTATCAGAACTCTCACTGACTACTACCGCACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTTAAGGGAACCGTGCTTGATGCAGGAGGAAGTCAGGCTAGTTTCTTGATGCAGTCTTACACGTTAACCAAGCGCTCATTCACCAACATGTCAAGGGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTATATTGTAGTCACTATCTGCATTGGAACCATTTATTTGAACGTGGGGACTGGCTATGATTCAATTCTGGCAAGGGGTTCATGTGTATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGGTTCCCTTCATTTGTTGAAGATATGAAGGTTTTCCAAAGAGAGAGGCTAAATGGCCACTATGGTGTCTTTGCATTTGTCATCAGCAACACGTTATCTGCGACGCCCTTCCTGATATTGATCACCTTCTTCTCCGGAACCATTTGTTACTTCATGGTTCGCCTGCATCCTGGCTTTTGGCATTATGTGTTCTTTGTCTTGTGCCTTTATGCCTGCGTTACAGTGGTTGAAAGCTTAATGATGGCCATTGCCAGCGTTGTCCCCAACTTCCTCATGGGTATCATAACAGGAGCTGGGATTCAGGGCATATTCATGTTAGTCTCTGGCTACTTTAGGCTCCCAAATGATATCCCAAAGCCGTTTTGGCGATATCCTATGTCATATATCAGTTTCCACTTCTGGGCACTGCAGGGACAATACCAGAATGATCTGAGGGGCTTGCTATTTGACAACCGGACACCAGACCTTCCCAAAATACCTGGTGAATACATCTTGGAGAATGTCTTCCAGATCGACGTGAACCGATCCAAGTGGATAGACTTAGGTGTGATCTTAAGCATGATTGTCATCTACCGTGTTATCTTTTTCGTTGTGATTAAAGTCAATGAGGATGTTACCCCTTGGGTTAGACGTTTCATAGCTAGGGAAAGAATGCAGCAGAAGAGTACAACACAGAATACAACAATTGCTCCTGATGTTCTCACTCAGTCCCCATCATTGAGAACCTATGTGTCTAGTCAAACGGCTGGTGTTACTCGCAAGAGGTAG 2091 0.4625 MRDSSEAKHVAMEIEASKPSSVGALPGLSPLSETLWREKANTEFIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTAVMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKQALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTFFAQAGFPCPALRNPSDHFLRCINSDFDKVKTTLKGSMKLRFEGSEDPLDKITTFEAIRTLTDYYRTSQHSYAAIQKVDEISKVKGTVLDAGGSQASFLMQSYTLTKRSFTNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYDSILARGSCVSFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVFAFVISNTLSATPFLILITFFSGTICYFMVRLHPGFWHYVFFVLCLYACVTVVESLMMAIASVVPNFLMGIITGAGIQGIFMLVSGYFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLLFDNRTPDLPKIPGEYILENVFQIDVNRSKWIDLGVILSMIVIYRVIFFVVIKVNEDVTPWVRRFIARERMQQKSTTQNTTIAPDVLTQSPSLRTYVSSQTAGVTRKR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1528 696 Pfam ABC transporter 74 223 IPR003439 GO:0005524
Dod06g1528 696 SMART AAA_5 81 252 IPR003593 -
Dod06g1528 696 Pfam ABC-2 type transporter 374 580 IPR013525 GO:0016020|GO:0140359
Dod06g1528 696 PANTHER OS04G0528300 PROTEIN 13 688 - -
Dod06g1528 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 13 688 - -
Dod06g1528 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 297 IPR003439 GO:0005524
Dod06g1528 696 CDD ABCG_EPDR 49 275 - -
Dod06g1528 696 Gene3D - 46 297 IPR027417 -
Dod06g1528 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 274 IPR027417 -
Dod06g1528 696 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1528 Dod-Chr6 20590239 20595135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1528 82 256 Calmodulin-binding Proteins AT2G36910 33.333 2.96e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1528 K05681 - gmx:100803731 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1528 06 20590239 20595135 Dod06g1528 06 20590239 20595135 ECH