Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1506 ATGACTACCAGGCGTTTGAGGGCATTCAAGCGATGGATGAAGTCGAATGGATTCGAATGGAGCGATGCACTTGAGTTTGTGGACACCCCAGATGAGGGAATAGCAGTGAAAGCCTTGTGTGAGTTGAAGGAAGGTGATGTTGTGGCCAAGATGCCGAAGGAGGCATGCCTCACCATAAAGACCAGTGGTGCAAGTGACATCATTGAAGGTGCTGGTTTGGGTGGCCTTTTGGGCCTTGCAGTTGCCATCATGTATGAGAGGAGCGTGGCTGTGGACTCTCCCTGGGCTGGTTACCTTCAGCTCTTGCCTCAACAGGAGTGCTTGCCATTCGTTTGGACACTCAATGAAGTCAATGAGCTTTTGTGTGGCACTGAGCTTCACCAGACAGTGCAAGAAGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTTTGCCCCTGTTGGATTTTGCACCTTCAAAGCTTAACCCAATATTTTTTGGTGTAGAGCAATACTTTGCTGCAAGAAGTCTTATTTCTTCGCGATCTTTCGAGATAGATGATTACCATGGTTCTGGCATGGTTCCCCTGGCAGATCTATTCAATCATAAAACAGGTGCTGAGGATGTACATTTTACTGCCTCCTCTAATGATGTATCTGACAATGATGTTGACGGTAACAACAATGATGAGGGCATCACTGATGAAGAAGCATTAGCTCCAAAATCCCCCGTAGATATGACTGATTTGAATGCTGCTCATGTTGACAACAGCATTGTTAGTGACTTGGAGTGTTCTTCAGATATGGGGGAGGATCCTTCAATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAGCTGAGGTATTTAATACTTATGGGTTGATGGGTAATGGTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAATCCCTATGATATTGTGAACGTTGATTTGGAACTGGTACTTCAATGGTGCTCTTCTTTGTTTTCTGATCGGCATGGTAGGGCAAGGGTCTCCCTCTGGAGAAGGCTAGGCTACTCTGCATGTGGCATCCAAAGTTCGGAATATTTTGAGATCTCATTTGATGGAGAACCACAGATTGAGCTCCTCATTTTGCTTTACATCATGTTATTGCCAGATACTGCCTACCATAAGTTGGACCTTTCGGTATCGGTAGCTGGAAATCGCCATGAATCAAGTGAAACCATTCTCTTGGGTGATAATATCTTTGCAACTAAATCATGTAACATGAGCAAGAAATCCTTGCTGACAAAGAGAGTATGCGATGCTTTGTCATTGATTGCCGATAAGAGAGAGAGTCTCTATGGTTTGGAATCAATAGAAGATGATATTGAGGCATTGAGGAAGTGTAGTTCTGTTATGGATAGAAAGATGTATCATTCTTTGATGCTGCGCATCAGTGAAAGGAAGATCCTTCAGAGGCTCAGAAATTATGCTTCACAGCCATTTAAAATCACTAATCATAGTTCTGCTAGGCAGAAGTTGAAAAGGACAACAAAGAAAGAAAGTTGA 1527 0.4316 MTTRRLRAFKRWMKSNGFEWSDALEFVDTPDEGIAVKALCELKEGDVVAKMPKEACLTIKTSGASDIIEGAGLGGLLGLAVAIMYERSVAVDSPWAGYLQLLPQQECLPFVWTLNEVNELLCGTELHQTVQEDKALMYEDWKENILPLLDFAPSKLNPIFFGVEQYFAARSLISSRSFEIDDYHGSGMVPLADLFNHKTGAEDVHFTASSNDVSDNDVDGNNNDEGITDEEALAPKSPVDMTDLNAAHVDNSIVSDLECSSDMGEDPSMLEMIMIKDVSSGAEVFNTYGLMGNGALLHRYGFTEQDNPYDIVNVDLELVLQWCSSLFSDRHGRARVSLWRRLGYSACGIQSSEYFEISFDGEPQIELLILLYIMLLPDTAYHKLDLSVSVAGNRHESSETILLGDNIFATKSCNMSKKSLLTKRVCDALSLIADKRESLYGLESIEDDIEALRKCSSVMDRKMYHSLMLRISERKILQRLRNYASQPFKITNHSSARQKLKRTTKKES* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1506 508 CDD SET_LSMT 23 303 - -
Dod06g1506 508 Gene3D set domain protein methyltransferase, domain 1 2 302 - -
Dod06g1506 508 Pfam SET domain 33 289 IPR001214 GO:0005515
Dod06g1506 508 PIRSF RMS1_SET 1 487 IPR011383 GO:0016279|GO:0018026
Dod06g1506 508 MobiDBLite consensus disorder prediction 208 228 - -
Dod06g1506 508 SUPERFAMILY SET domain 266 307 IPR046341 -
Dod06g1506 508 Gene3D - 305 494 IPR036464 -
Dod06g1506 508 ProSiteProfiles SET domain profile. 22 289 IPR001214 GO:0005515
Dod06g1506 508 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 486 - -
Dod06g1506 508 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 5 486 - -
Dod06g1506 508 SUPERFAMILY SET domain 4 208 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1506 Dod-Chr6 20149305 20152232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1506 2 506 NAC Transcription Factor Family AT3G56570 55.019 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod06g1506 SET 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1506 K05302 - gmx:100794971 763.066