Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1504 ATGGAACACAGCAATTCTCCTGTTGATCACAAGAAGCCAGAGAAAAATACAACCATAAGATATAAGGAATGCCTTAAGAACCATGCAGCATCACTTGGTGGCAATGCAACTGATGGGTGTGGTGAGTTCATGCCTTCTGGAGAAGATGGCACCCTTGAGGCTCTCAAGTGCTCAGCTTGCAACTGCCACAGAAACTTCCACAGAAAAGAGATGGAATCTGATTCTAACAATAGCCCTTCTTCTCATCAGCATTATATTCTTTCAGTGATTCCTAATAGTACTACTACCACTCAAATGATGAGACCCCTTTTTGCTCAATTTTCTCCAAACAACAAAAGTGGGTCAATTAGCCCTTCTGATGATAACTCTGATGATCAGATTAAGGAATGTGAAGATGGGATTAGGGAGGTGGGAAATCCAAGTGGGAAAGTGAAGAAGAGGTTCAGAACAAAGTTCACACAGGAGCAGAAGGAGAAGATGCTGGGTTTTGCAGAGAAGGCAGGGTGGAGGATACAGAAGCTGGAGGAATCCATGGTGCAGAAGTTTTGCCAAGAGGTTGGAATCAAGAGGAGGGTCCTCAAAGTGTGGATGCACAATAACAAGAGCACTTTTTCCAAGAGGATCAATCTCTCCACCAGCTAG 642 0.4393 MEHSNSPVDHKKPEKNTTIRYKECLKNHAASLGGNATDGCGEFMPSGEDGTLEALKCSACNCHRNFHRKEMESDSNNSPSSHQHYILSVIPNSTTTTQMMRPLFAQFSPNNKSGSISPSDDNSDDQIKECEDGIREVGNPSGKVKKRFRTKFTQEQKEKMLGFAEKAGWRIQKLEESMVQKFCQEVGIKRRVLKVWMHNNKSTFSKRINLSTS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1504 213 SUPERFAMILY Homeodomain-like 138 206 IPR009057 -
Dod06g1504 213 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 21 70 IPR006456 -
Dod06g1504 213 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 11 206 - -
Dod06g1504 213 MobiDBLite consensus disorder prediction 106 121 - -
Dod06g1504 213 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 20 71 IPR006456 -
Dod06g1504 213 MobiDBLite consensus disorder prediction 106 127 - -
Dod06g1504 213 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 145 201 IPR006455 -
Dod06g1504 213 Gene3D - 134 206 - -
Dod06g1504 213 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 206 - -
Dod06g1504 213 Pfam ZF-HD protein dimerisation region 19 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1504 Dod-Chr6 20137038 20137831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1504 15 211 ZF-HD Transcription Factor Family AT1G14440 52.804 1.76e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod06g1504 ZF-HD_dimer 6.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1504 - - gmx:100793926 281.952