Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1501 ATGGCCTTTTTAATTAATAATTTGTGTTGGATTTTGATAGGGTTTCTTCTAATAAGTTTTACCTTTTATAAGAATAAGTCATTCTGGTCTTTTGTTACTATGTTTATTAAGATTTCAATCAGTTTGTGGTCATTGAGGATTTCTCTTGTTAATGAGTTTAGGCTGTTGGGTAAGTTCCTTGCTTTTTATATGTTACAGAATTCTGAACAAACACGTCTCGGATTTGTATTTAACAAATTGGTGAAGGAGATTGGAGAACCTGTCGACTTTGAACTTCCAGATTGGTTTAATAAGTTGAAGCCAATGCAGTGCACCAATATAAAACGCAATATTTATCTGATTAAAAAGGTCAAAAAAAGGCTTGATGATGATGGCATATTTTGTTCTTGTACTCCATCACCTGGATCTTCTGCTGTATGCGGTAAAGATTGCCACTGTGGGATGCTTCTCTCTAGCTGCTCTTCAGGCTGTAAATGTGGGATTTCCTGTCTTAACAAACCATTCCAGCATCGACCCATTAAGAAGATGAAATTGGTTCAGACCGAGAAATGTGGTTCTGGAATTGTGGCAGATGAAGATATCCAGCAAGGAGAGTTTGTGATAGAATATGTTGGAGAAGTCATTGATGATAAGACATGTGAGGAAAGGCTGTGGAACATGAAGCTTCGTGGGGAGACAAACTTCTACTTATGTGAAATTAATCGGGATATGGTGATTGATGCAACATATAAAGGAAATAAATCAAGATATATCAATCATAGCTGCTGTCCTAATACTGAGATGCAGAAATGGATAATTGATGGCGAAACAAGAATTGGCATATTTGCAACTCGTAACATAAAGAAGGGCGAGCATCTGACTTATGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGCGCTAGTGGGTGCAGGCGTAAGCTTGGTGTCCGACCTACCAAGCCTAAAACGTCTTCAGATGCTGCATTAAAATTATTTGGATGTCAGAATGGAGGTTTGCATATAGGAAGTTCTCATGTTGGCCAATCAAAATGTGTACGCAATTGCATTGGAGAAGTTGTTAGGATAAAACACCTTGATAACGTGAGATTTGGAATTATTAAAAGGTTTGATGAATATTCCAGAAAACACTCGATCATGTTTGAGGATGGATGCGTTGAATTTTATGACATGTCTAAGGAAGATTGGGAACTAGTGAGATTGTGA 1218 0.3744 MAFLINNLCWILIGFLLISFTFYKNKSFWSFVTMFIKISISLWSLRISLVNEFRLLGKFLAFYMLQNSEQTRLGFVFNKLVKEIGEPVDFELPDWFNKLKPMQCTNIKRNIYLIKKVKKRLDDDGIFCSCTPSPGSSAVCGKDCHCGMLLSSCSSGCKCGISCLNKPFQHRPIKKMKLVQTEKCGSGIVADEDIQQGEFVIEYVGEVIDDKTCEERLWNMKLRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRNIKKGEHLTYDYQFVQFGADQDCHCGASGCRRKLGVRPTKPKTSSDAALKLFGCQNGGLHIGSSHVGQSKCVRNCIGEVVRIKHLDNVRFGIIKRFDEYSRKHSIMFEDGCVEFYDMSKEDWELVRL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1501 405 ProSiteProfiles Post-SET domain profile. 297 313 IPR003616 -
Dod06g1501 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 73 333 - -
Dod06g1501 405 ProSiteProfiles SET domain profile. 174 291 IPR001214 GO:0005515
Dod06g1501 405 Pfam SET domain 185 290 IPR001214 GO:0005515
Dod06g1501 405 PANTHER SET DOMAIN PROTEINS 73 333 - -
Dod06g1501 405 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 97 364 IPR025787 -
Dod06g1501 405 SMART shorttest3 123 173 IPR006560 GO:0005634|GO:0018024
Dod06g1501 405 SMART PostSET_3 297 313 IPR003616 -
Dod06g1501 405 Gene3D SET domain 94 329 IPR046341 -
Dod06g1501 405 ProSiteProfiles AWS domain profile. 123 172 IPR006560 GO:0005634|GO:0018024
Dod06g1501 405 PANTHER SET DOMAIN PROTEINS 347 402 - -
Dod06g1501 405 CDD SET_ASHR3-like 175 313 - -
Dod06g1501 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 347 402 - -
Dod06g1501 405 SUPERFAMILY SET domain 97 309 IPR046341 -
Dod06g1501 405 SMART set_7 174 297 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1501 Dod-Chr6 20098416 20107388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1501 147 309 C2H2 Transcription Factor Family AT2G23740 33.880 9.14e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod06g1501 SET 5.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1501 - - gmx:100808183 606.29