Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1487 ATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTAATGCTCCTTCGCTGAAAGTTCTGGATGTTCACAACAATACTCTTTCTGGGAATGTACCTCCTGCTCTCAAGAGGCTAGATGATAGGTTTTTGTATGAGTACAATCTGGGGCTATGTGGAGTTGGCTTTCCATCCCTGAAAACTTGCAATGCTTCCAATCATGTCGATCCCAGCAGACCTGAACCTTACGGAGCATCAACAAGAGATATCCCAGAAACTGCGAATGTAAAGTTACCTTGCAATGGAACTCGGTGCCTAAACGCTTCAAAATCGAATCAAGCAACATCCATTACTGTTGGCATAGTTGTGGTTGTAATTGCAATCTCAGCAATTGGTGTTTTGACCTTCACATTATATCGTAGGCGAAAACAGAAGCTAGGAAATTCTTTTCATATCTCTGATAGCAGTCCAAGTACTGATGAAGCCAAGGGCATATGCAGGAAAAGTGGATCTCCTTTGGTCAGCCTTGAGTACTCCAGTGGATGGGACCCTTTGGCTGATAGTAGGAACTTCAATGGGGATAGCCAAGATGTGTTCCAGAGATTCAGGTTCAACTTGGAGGAAGTGGAGTCAGCTACTCAATATTTCTCAGAGTTGAATTTGCTGGGTAAGAGCAACTTTAGTTCAACATATAAAGGTGTTTTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCAGATGAAGCTGAGTTTTTGAAGGGATTGAACATTTTAACCTCACTGAGGAATGATAATTTAGTGAGATTGAGAGGATTTTGCTGTTCGAGGGGACGAGGTGAATGCTTCCTGATTTATGACTTTGTTTCTAATGGAAACCTGTCCTGCTTCCTTGATGTTAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCATACAAGGCAAACAAACCAGTTCTTGTCCACCAAAACATCTCAGCTGAGACCGTGCTCATCGATCAGCGATATAACCCATTGCTGGTGGATTCAGGCCTGCACAAGCTTCTTACTAATGACATTGTCTTCTCTGCACTAAAGGCTAGTGCAGCAAAGGGTTACCTGGCTCCTGAGTACACCACCACTGGCCGGTTCACCGAGACAAGTGATGTTTATGCTTTCGGGGTGCTGCTTTTCCAGATCCTCTCAGGGAATCAGCTGATCACCAGCTCAATCAGGCTTGCTGCAGAAGCCTCAAGATTCCAAGAATTCATTGATCCAAATCTCCATGGAAGGTTCTTTGAATATGAAGCAGCTAAACTGGCGAAAATTGCTTTGCTTTGCTGCCATGAGTCCCCTTTTGAGAGGCCATCTATGGAAGCAGTTGTTCAAGAACTGGGGAATTGTAGTAGCTGTCTCCGAGTTCCATGA 1479 0.4361 MLVRLDLSSNNLFGSIPTSLANAPSLKVLDVHNNTLSGNVPPALKRLDDRFLYEYNLGLCGVGFPSLKTCNASNHVDPSRPEPYGASTRDIPETANVKLPCNGTRCLNASKSNQATSITVGIVVVVIAISAIGVLTFTLYRRRKQKLGNSFHISDSSPSTDEAKGICRKSGSPLVSLEYSSGWDPLADSRNFNGDSQDVFQRFRFNLEEVESATQYFSELNLLGKSNFSSTYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNDNLVRLRGFCCSRGRGECFLIYDFVSNGNLSCFLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPVLVHQNISAETVLIDQRYNPLLVDSGLHKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTETSDVYAFGVLLFQILSGNQLITSSIRLAAEASRFQEFIDPNLHGRFFEYEAAKLAKIALLCCHESPFERPSMEAVVQELGNCSSCLRVP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1487 492 Pfam Protein tyrosine and serine/threonine kinase 221 482 IPR001245 GO:0004672|GO:0006468
Dod06g1487 492 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 487 - -
Dod06g1487 492 CDD STKc_IRAK 223 482 - -
Dod06g1487 492 SUPERFAMILY Protein kinase-like (PK-like) 193 482 IPR011009 -
Dod06g1487 492 Gene3D Phosphorylase Kinase; domain 1 188 295 - -
Dod06g1487 492 Gene3D Transferase(Phosphotransferase) domain 1 296 489 - -
Dod06g1487 492 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 487 - -
Dod06g1487 492 ProSiteProfiles Protein kinase domain profile. 217 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1487 492 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Dod06g1487 492 SUPERFAMILY L domain-like 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1487 Dod-Chr6 19917641 19920013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1487 1 330 Miscellaneous Gene Families AT4G22730 51.744 5.29e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dod06g1487 PK_Tyr_Ser-Thr 9.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1487 - - gmx:100775422 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3178 02 66758664 66762670 Dod06g1487 06 19917641 19920013 PCT