Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1482 ATGGAGGAAAAGGAGAATTTTAGTTCTGGGCATGCAGTGGTGGGTGGTGGTGGTGATGCTGCCCCAGGGAGCTTCCACGTGTCCCCTAGAATTGAGACACTGGATTTTTCCGGTGCTGCCACGCCGGCGCCGGCAAACGAGGGGAAGAAGAAAAGGGGAAGGCCTAGGAAGTATGGACCGGATGGCAAGGCGGCGGCGGTGGCAGGGGCACTGTCCCCCATGCCGATATCGGCGTCAATTCCGTTTACCGGAGAGTTCTCAGCCTGGAAAAGGGGTAGGGGGAGGCCTGTTGAGTCTATCAAGAAGTCATCATATAAGTATGAATTTGAAAGTCCACCTCCAGGACCAGGTGATGGAATCCAATACTCAGTTGGTGCCAATTTCACACCACATGTGCTTACAGTAAATGCGGGCGAGGATGTTACGATGAAGATTATGTCCTTTCAACAAGGATCACGTGGTATATGCATTCTCTCTGCAAATGGCACAATTTCAAATGTTACACTTCGTCAACCCACTTCTTCTGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCGAACGAGAATGGAATCACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTAGCTGGTCCAGATGGTCGAGTAATGGGAGGAGGACTCGCAGGTTTGCTCATAGCTGCAGGTCCTGTTCAGGTAAATCTCATGCATGCTATGAAAATGATGTTCAATAAAATATTCTAG 756 0.4921 MEEKENFSSGHAVVGGGGDAAPGSFHVSPRIETLDFSGAATPAPANEGKKKRGRPRKYGPDGKAAAVAGALSPMPISASIPFTGEFSAWKRGRGRPVESIKKSSYKYEFESPPPGPGDGIQYSVGANFTPHVLTVNAGEDVTMKIMSFQQGSRGICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPNENGITRSRSGGMSVSLAGPDGRVMGGGLAGLLIAAGPVQVNLMHAMKMMFNKIF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1482 251 CDD DUF296 129 237 IPR005175 -
Dod06g1482 251 Gene3D - 130 251 - -
Dod06g1482 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 249 - -
Dod06g1482 251 MobiDBLite consensus disorder prediction 1 64 - -
Dod06g1482 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 18 237 IPR039605 GO:0003680
Dod06g1482 251 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Dod06g1482 251 SMART AT_hook_2 49 61 IPR017956 GO:0003677
Dod06g1482 251 ProSiteProfiles PPC domain profile profile. 125 251 IPR005175 -
Dod06g1482 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 240 IPR005175 -
Dod06g1482 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 18 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1482 Dod-Chr6 19853322 19858721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1482 45 237 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 68.182 2.41e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1482 - - gmx:100776862 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3170 02 66668396 66673190 Dod06g1482 06 19853322 19858721 PCT