Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1457 ATGGAAAGCACTGTGGCATATGAGAATGATCTCAACCTCAAGGCAACAGAACTTAGGTTGGGGTTGCCAGGGACTGAGGAAAATGAGGAAAAGAAAGCACTGTCTGGTGTTAGAGCCAACAAAAGGCCATTGCCTGAGACTTCTGAGGAGTGTGTTTCAAAGGGATCTAATTCTCAACATGTGAAAACTAGTACTGATCATGCTGCCCCTCCTTCCAAGGCAAAGATAGTGGGGTGGCCACCAATCAGATCCTACAGGAAGAACAGCCTTCAGGATCAGGCTGAAGCTTCCGGGATCTATGTGAAGGTGAGCTTGGATGGAGCACCTTACCTCAGAAAGATTGATTTGAGGGTCTATGGAGGGTATCCAGAACTCCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGAGAGTACTCTGAAAAGGAAGGTTATAAGGGATCTGATTATGCTCCTACATATGAGGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCATGCAAAAGACTAAGAATCATGAAAGGATCAGAAGCTAGAGGTTTGGGTTGTGGGGTATGA 588 0.4541 MESTVAYENDLNLKATELRLGLPGTEENEEKKALSGVRANKRPLPETSEECVSKGSNSQHVKTSTDHAAPPSKAKIVGWPPIRSYRKNSLQDQAEASGIYVKVSLDGAPYLRKIDLRVYGGYPELLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCGV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1457 195 ProSiteProfiles PB1 domain profile. 98 185 IPR000270 GO:0005515
Dod06g1457 195 MobiDBLite consensus disorder prediction 50 66 - -
Dod06g1457 195 Gene3D - 92 195 - -
Dod06g1457 195 MobiDBLite consensus disorder prediction 23 48 - -
Dod06g1457 195 SUPERFAMILY CAD & PB1 domains 89 184 - -
Dod06g1457 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 192 IPR003311 GO:0005634|GO:0006355
Dod06g1457 195 PANTHER AUXIN-INDUCED PROTEIN 1 192 - -
Dod06g1457 195 MobiDBLite consensus disorder prediction 22 73 - -
Dod06g1457 195 Pfam AUX/IAA family 16 192 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1457 Dod-Chr6 19519902 19521505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1457 91 191 B3 DNA Binding Superfamily AT2G46530 35.644 1.79e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod06g1457 AUX_IAA 1.7e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1457 K14484 - gmx:100527777 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1457 06 19519902 19521505 Dod06g1457 06 19519902 19521505 ECH