Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g1454 | ATGTCGACGGGGCAAGCGGTGAAGGTCAGCAGGGCGAAGCTCTCGGCATGCTTAACATGTCCTTTGTGTAATAAATTCTTCAGAAATGCCACCACTATATCTGAATGCTTGCACACTTTTTGCAGGGAATGCATAGAGAAGAAGCTAATAGATGAGAATTTGAAGCACTGTCCTGTATGCAAAGTTGACTTGGGTTGTTCTCCATTGGATAAATTAAGGCCAGATCACAATCTGCAAGATCTGAGGAACAAACTTTTGCCTCCTGAAGGAAAAAGTGATGAGGCACCTCACAATGAGGATTCAGGTGATGCATTGGTAGCCAAAAGAAAGACGAAATCTCTGTCTTCGTTAAAAGCCAATGCAAGAGGAGCAAAAGCTACTGAAAGAAAAGTTTCCAACCCAAAAGAATCAGATTTTCCTACTCCTCCTAAGCCTGATAAGGATGCAGATGTCAAGAAAGATGAAAAAGAGCGCACCATAGGGATTTTGGATGAAGTTAATGTACATATATCTGCAAGAAAAGCAAAAGCTGCGGCGAGGAAAAAATTTGTCCCAAGAGAGTTCACTCCTACTCGTCAACCTGACAAAGTAACAGGAGATCAGAAGAAAGATGATGGCCACCTTCAGCTTCAAACTTCCAAAACCAGAATTCAGAAGGCTTCAAGACCAGATTCAAGTCAACAAATAGTTCCCAACAAGATTGCAGTGGACAATGGTGATGAGTCATGGAAAGACAAGGCTGATATGTGTGATGAGCCATTGAATAGCCTGGTGGAATCTGCAAGAAAGAACAAATCCAGTAATAAGTCCACCATGAAAGGCAATTCTGTCATTCCACTGCCTGTGGAACCAAGTAACAATGACTCCCCGGTGCCTAAGGTTGAAGTTAAGAAAAATTGTCTCCTAGACCAAGCAACCGGTGATCAAACCGAATCGAATCCTTCAAAATCAGATTCTATCAAACCTAGAACGTCGCAGGGCACCCAAGAAAGAGCGGCCAAATTCTCTGAGGACTTGAATGTTCCAGCACAACCCGTGATTACTTCAAATGGTGAAAGCAACAATGGATTCAGTCCAATTTGGTTCTCCTTGGTTGTTTCTGAAGAGAAGGAAGCTGGTGCACAATTGCCACAAATATCTTCAGGCTACCTAAGGATCAAGGATGGTAGTTTACCTGTTTCCTTTATCAAGAAGTATATAGTGAAGAAACTGGGTCTTGCCAGAGAATCCGAGGTGGAGATCTCAGTGCGTGGTAAGCCAGTTTTAGCTTCCTTGCAACTGCAAAACGTAGTAGACATGTGGTTGCAAACAAAGCCAACCAATGAGAAGATTCAGACATATGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATGGTCGAGCAGATTAA | 1398 | 0.4263 | MSTGQAVKVSRAKLSACLTCPLCNKFFRNATTISECLHTFCRECIEKKLIDENLKHCPVCKVDLGCSPLDKLRPDHNLQDLRNKLLPPEGKSDEAPHNEDSGDALVAKRKTKSLSSLKANARGAKATERKVSNPKESDFPTPPKPDKDADVKKDEKERTIGILDEVNVHISARKAKAAARKKFVPREFTPTRQPDKVTGDQKKDDGHLQLQTSKTRIQKASRPDSSQQIVPNKIAVDNGDESWKDKADMCDEPLNSLVESARKNKSSNKSTMKGNSVIPLPVEPSNNDSPVPKVEVKKNCLLDQATGDQTESNPSKSDSIKPRTSQGTQERAAKFSEDLNVPAQPVITSNGESNNGFSPIWFSLVVSEEKEAGAQLPQISSGYLRIKDGSLPVSFIKKYIVKKLGLARESEVEISVRGKPVLASLQLQNVVDMWLQTKPTNEKIQTYVGSSAKDFVMVLSYGRAD* | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g1454 | 465 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 6 | 463 | IPR044807 | GO:0004842 | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 211 | 233 | - | - | |
Dod06g1454 | 465 | CDD | RING-HC_PCGF | 18 | 60 | - | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 238 | 252 | - | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 259 | 283 | - | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 81 | 155 | - | - | |
Dod06g1454 | 465 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED | 6 | 463 | - | - | |
Dod06g1454 | 465 | SUPERFAMILY | RING/U-box | 16 | 86 | - | - | |
Dod06g1454 | 465 | ProSiteProfiles | Zinc finger RING-type profile. | 20 | 61 | IPR001841 | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 178 | 334 | - | - | |
Dod06g1454 | 465 | Pfam | Zinc finger, C3HC4 type (RING finger) | 20 | 60 | - | - | |
Dod06g1454 | 465 | SMART | ring_2 | 20 | 60 | IPR001841 | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 196 | 210 | - | - | |
Dod06g1454 | 465 | ProSitePatterns | Zinc finger RING-type signature. | 36 | 45 | IPR017907 | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 303 | 333 | - | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 81 | 107 | - | - | |
Dod06g1454 | 465 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 115 | IPR013083 | - | |
Dod06g1454 | 465 | MobiDBLite | consensus disorder prediction | 123 | 155 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g1454 | Dod-Chr6 | 19427181 | 19431126 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g1454 | 1 | 387 | C3H Transcription Factor Family | AT2G30580 | 32.576 | 6.93e-45 | 158 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g1454 | K16277 | - | tcc:18603122 | 339.347 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod06g1454 | 06 | 19427181 | 19431126 | Dod06g1454 | 06 | 19427181 | 19431126 | ECH |