Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1437 ATGGGGCAAAGCCAATCCAAGGGCGAGTTGCTGTACCAGCAGGTCTGTTATGGGAACACAGAAGGAATCAGGGCCCTTCATAGAGAAGGTGCAGGCCTTGAGTGGATTGACAGAGAAGGAAAAACACCCTTGATTGTTGCTTGTATGAACCCTGAGCTTTATAATGTTGCCAAAACTTTGATAGAACTTGGAGCCAATGTCAATGCATACCGTCCAGGCCGTCATGCTGGGACTCCATTGCATCATGCAGCTAAAAGGGGCCTTGAAAGTATTGTTAAGTTACTTCTTTTACATGGAGCCAATCCCTTGGTCTTGAATGATGATTGTCAAACTGCTCTTGAGGTCGCAAGGGCAAAAGGGCACAGCAACGTTGTTAGGGCAATTGAGAGTCATCTATGCTTGTTCTCTGGTTGGTTGCGAGAGTTTCATGGACCGGGGTTTCTAGAAGTTGTAGCTCCTCATTTGGTATCTAGAAAAGTTTGGGTGGTTGTTTTACCAGTTGGCTCCCGTAATCCTACGAGACCTTACAAGTTGGAGCTTGCGATATATTCTACTTTGCAGGATGCACAACCACGTACTATAATTGCTCTGTGGAAGGCTAATTTAGAAGAACCAAAGCTTCACCAGTCTGATCCATCAGTGTCAATTGTTGATCATACTACCAAAACACGTGTCAAACTAGGGCCTGCAAGTGAGAACGATAGGCATCAGCTTACATGGTTTTCTAATGCCTGCAAAGGAATTCCACAGGCAAGTCCGGCATTTTTGCATGGTAATGCGGCTACAGTTCCGCCCACGGCACCACCAGATGCAGAAGATGCAGAGCTGGCTATGGCCATCAGTGCATCCCTGCAGCATGCCATTCAGGAGAGACCACCTTTTCCACCTGCCCAGCCAAACTATGAAGCAAGCTCTTCAAGTGGCAGAGTCAACCCAAGCAAACAAGGTTTTCTGGGTACGCCAAATCCAAATGCAAGCGACAGTGAGCCTGTACAGGAAGCTAATCCAGGTGGCAATAATCAGAATGCCCAAATCCATGACAATGTCTCTAGTGGTCTGGATTCCAATCCATCAGCTCCTCCGATTGCCGACGATCTTCCAATCGACGGCCCCATTCATTATCCTTCAATTGACTCGAGCCCTGTGGATATATCATCTCCAGTTGTTGAGAACCTACCTAAAGAAGAAAAGAATGCTGGCGGAAGCGGTTCATCGTGTGTGATATGTTTGGATGCTCCGGCAGAGGGGGCATGCATACCATGTGGCCATGTGGCTGGATGCATGTCTTGCTTGAATGAGGTCAAGACAAAGAAATGGGGTTGTCCAGTATGTCGAGCTAAGATAGACCAAGTCATAAAGCTATATCATGTTTGA 1374 0.4702 MGQSQSKGELLYQQVCYGNTEGIRALHREGAGLEWIDREGKTPLIVACMNPELYNVAKTLIELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLLHGANPLVLNDDCQTALEVARAKGHSNVVRAIESHLCLFSGWLREFHGPGFLEVVAPHLVSRKVWVVVLPVGSRNPTRPYKLELAIYSTLQDAQPRTIIALWKANLEEPKLHQSDPSVSIVDHTTKTRVKLGPASENDRHQLTWFSNACKGIPQASPAFLHGNAATVPPTAPPDAEDAELAMAISASLQHAIQERPPFPPAQPNYEASSSSGRVNPSKQGFLGTPNPNASDSEPVQEANPGGNNQNAQIHDNVSSGLDSNPSAPPIADDLPIDGPIHYPSIDSSPVDISSPVVENLPKEEKNAGGSGSSCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYHV* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1437 457 MobiDBLite consensus disorder prediction 300 357 - -
Dod06g1437 457 SMART ring_2 406 444 IPR001841 -
Dod06g1437 457 Gene3D - 2 78 IPR036770 -
Dod06g1437 457 Pfam Ankyrin repeats (many copies) 60 116 IPR002110 GO:0005515
Dod06g1437 457 PANTHER ROLLING PEBBLES, ISOFORM B 1 457 - -
Dod06g1437 457 MobiDBLite consensus disorder prediction 290 380 - -
Dod06g1437 457 Pfam Zinc finger, C3HC4 type (RING finger) 404 451 - -
Dod06g1437 457 ProSiteProfiles Ankyrin repeat region circular profile. 75 101 - -
Dod06g1437 457 Gene3D - 79 132 IPR036770 -
Dod06g1437 457 SMART ANK_2a 39 69 IPR002110 GO:0005515
Dod06g1437 457 SMART ANK_2a 75 104 IPR002110 GO:0005515
Dod06g1437 457 SUPERFAMILY Ankyrin repeat 10 133 IPR036770 -
Dod06g1437 457 ProSiteProfiles Ankyrin repeat profile. 39 72 IPR002110 GO:0005515
Dod06g1437 457 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Dod06g1437 457 ProSiteProfiles Zinc finger RING-type profile. 406 445 IPR001841 -
Dod06g1437 457 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT35, PUTATIVE-RELATED 1 457 - -
Dod06g1437 457 ProSiteProfiles Ankyrin repeat region circular profile. 39 69 - -
Dod06g1437 457 SUPERFAMILY RING/U-box 405 451 - -
Dod06g1437 457 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 390 457 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1437 Dod-Chr6 19166680 19172738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1437 398 454 C3H Transcription Factor Family AT3G06140 33.333 1.39e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1437 - - lang:109354249 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1437 06 19166680 19172738 Dod06g1437 06 19166680 19172738 ECH