Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1433 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGAAGTGGGTCGTTTGGAGAGCTCTATTTGGGTGTTAATGTGCAAAGTGGAGAGGAAGTGGCTGTTAAGCTGGAATCTGTGAAGACCAAGCATCCCCAACTTTACTATGAGTCAAAACTGTATATGCTTCTTCAAGGGGGAACTGGTATACCCCATTTAAAATGGTTTGGAGTTGAGGGCGACTACAATGTCATGGTGATTGACCTTCTTGGACCGAGTCTGGAAGACTTGTTTAACTACTGCAACAGGAAATTCACTCTGAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCACCGGGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGGCGCAAGGCAAATCAGGTATACATAATCGATTATGGTCTTGCAAAAAAGTATCGTGATCTTCAAACCCACAAGCATATACCATACAGGGAAAACAAAAATCTCACTGGAACTGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTGCTGATGTACTTCTTGAGAGGAAGTCTCCCTTGGCAAGGCTTGAAAGCTGGGACCAAAAAGCAAAAATATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTATTATGCAAGTCATATCCATCGGAATTCACGTCCTACTTTCACTATTGTCGATCCTTGCGGTTTGAAGATAAGCCTGATTATTCTTATCTTAAGAGACTCTTTCGTGACCTATTCATCCGAGAAGGGTATCAGTTTGACTATATATTTGATTGGACTGTATTGAAATATCCGCAAATTGGATCCAGTTCTAGAGCTCGACCAAGTGGGAAACCAGCCATAAACCCAGGACCATCTGGAGAGAAATTAGAACGACCTCCAGGTGGACCAGAGACTCGGGATAGATTCTCAGGTGCAGTTGAGGCATTTGCAAGAAGGAATGGCTCTGGGCTTGGTCTGCATGGTGGTCATTCTAGGCATAGGTCTTCAGATGATGTGCCATCTTCCAAAGATGTGCAAGCTGATTCGGAGAGGCCACGAAGCTCTTCTCGCAATGGCAGTGCCTCAAAAAGGCCTGTCGTTTCGAGCAGCCGGCCGAGTTCTTCTGGTGAGCCTAGTGAGAGCCGCCCTAGTCGGCTGGTCGCGAGCAGCAGTCGTCTATCTACAACCCAAAGGAGTCAACCGGGTTTCGAGTCCAAATCATCCTTTACTCGCCCTTCCGGGGCAAGGGGAGGTCGTGATGATACCCTCAGGAGCTTTGAACACCTGTCAATTGGTACATGGAAAAGGAAATGA 1389 0.4521 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLYYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTVLKYPQIGSSSRARPSGKPAINPGPSGEKLERPPGGPETRDRFSGAVEAFARRNGSGLGLHGGHSRHRSSDDVPSSKDVQADSERPRSSSRNGSASKRPVVSSSRPSSSGEPSESRPSRLVASSSRLSTTQRSQPGFESKSSFTRPSGARGGRDDTLRSFEHLSIGTWKRK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1433 462 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 448 - -
Dod06g1433 462 Gene3D Transferase(Phosphotransferase) domain 1 1 314 - -
Dod06g1433 462 MobiDBLite consensus disorder prediction 377 437 - -
Dod06g1433 462 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod06g1433 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod06g1433 462 MobiDBLite consensus disorder prediction 300 333 - -
Dod06g1433 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1433 462 PANTHER CASEIN KINASE-RELATED 1 448 - -
Dod06g1433 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Dod06g1433 462 MobiDBLite consensus disorder prediction 345 449 - -
Dod06g1433 462 SMART serkin_6 9 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1433 462 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1433 462 MobiDBLite consensus disorder prediction 355 376 - -
Dod06g1433 462 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1433 Dod-Chr6 19102682 19108252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1433 8 213 MAP Kinase Kinase Kinase AT3G06030 26.389 1.04e-14 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod06g1433 Pkinase 8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1433 K08960 - jre:108991207 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1433 06 19102682 19108252 Dod06g1433 06 19102682 19108252 ECH