Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1424 ATGAGACACAGATATCTTCATCTCAAGCTCAAGGTTTTCCGGCTGAAACGGTTTCTGCTAGGCCGTGGAGGCAGATGGAAAAAGCTCATGCCTGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGCTATTATGTGGTGGAGCATCATATGATCAGAGATGGTTCTGAGGACGCGGACTCAGAGTTTGATTCAGTTGTGGTGCAGAGAGAGCAAATGGATCACACTGAATTGTGGTATTTTGGAATCTCTAGTGCAATAATTGGAGATGGGGTCACCGCGTACATGCAATCCAATTTCTTCAACAAGAAGCTTCAGGAGCCTCATATAAGGCGGAAAGGCAAAGAAACACTGAAGAGAGCTTACCTTGGTGCAAGGGCAAGGATCAGAGAGGAAAATGAATCAGAGGAAAGATGCAGAATGGGTTCAGCATCTGTTATGGTGATAAATAGAGAAAAACTTGTGATAGCCAACATGGGAGATTACAGAGCTGTTGTATGCAGAAATGGTATAGCTCATCTGGCAAATAGCAGATATCAACAATCAGCCAAAAGACATTGGTCACGAAGACTCTTTTCAGTACACATACTAGCATGTGAATCAGGAAATGCAACAGGTACAAGGCATTCTAGAGGCTCAGAACTTTTTGTCAGAGGTGAAAAGATCGATTCCGATACTGAATTCTTGATATTGGCTAGCAATGGCATATGGGAGGTGATGAATAATCAAGAGGCTGTGAGTCTGATCAGTCACATACTGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTGAATAGGATGAGCAAAAGCAACATCTCGTGCTTAGTCATTCGCTTTGACTGA 855 0.4327 MRHRYLHLKLKVFRLKRFLLGRGGRWKKLMPAKKPSWMMPITHGYYVVEHHMIRDGSEDADSEFDSVVVQREQMDHTELWYFGISSAIIGDGVTAYMQSNFFNKKLQEPHIRRKGKETLKRAYLGARARIREENESEERCRMGSASVMVINREKLVIANMGDYRAVVCRNGIAHLANSRYQQSAKRHWSRRLFSVHILACESGNATGTRHSRGSELFVRGEKIDSDTEFLILASNGIWEVMNNQEAVSLISHILDPQEAAECLAKEALNRMSKSNISCLVIRFD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1424 284 ProSiteProfiles PPM-type phosphatase domain profile. 61 283 IPR001932 -
Dod06g1424 284 Pfam Protein phosphatase 2C 221 276 IPR001932 -
Dod06g1424 284 Pfam Protein phosphatase 2C 96 174 IPR001932 -
Dod06g1424 284 Gene3D - 46 284 IPR036457 -
Dod06g1424 284 PANTHER ALPHABET, ISOFORM E-RELATED 6 283 - -
Dod06g1424 284 CDD PP2Cc 116 283 IPR001932 -
Dod06g1424 284 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 283 - -
Dod06g1424 284 SUPERFAMILY PP2C-like 37 284 IPR036457 -
Dod06g1424 284 SMART PP2C_4 40 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1424 Dod-Chr6 18990409 18993767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1424 6 283 PP2C-type Phosphatase Gene Family AT3G23360 49.104 3.71e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1424 K19704 - gmx:100794054 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1424 06 18990409 18993767 Dod06g1424 06 18990409 18993767 ECH