Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1412 ATGTTTGATGATGATTCAGGAAAATATCAAGTGGAATGTGGCAGCATGAGAATATTTAAGAGTTGGATAAGTGAGAGGAAGTTTAGCATTAGAGAGAGACTGAGAAAGATGATGATCAAGTGCATATGTTCCGGGGAGCAAGTAGTGGTGGATGAAATATGCTATTCATCAGAGTCCCTTGCAACAAGGGACTATTCAGCATCAGCAAGTGGCTATTCTTCACGCCCTGGTGGTGAAACCGATACAAAGATGGATAATAGCAACATTGAAGAAGCAGAATCAACACTTCGTGAAAGTGGTTATTTAAACTATGAGGAAGCTAGAGCCTTATTGGGGAGGCTTGAGTATCAGAAGGGTAATTTTGAAGCTGCACTTTATGTATTTGAAGGAATAGATATTGCTGCTGTCACTCCAAAAATGAAAGTTTCTATATCTAGAAGATGTGAAACCAATAGACGGCGATCACAAAGTGATGCAGTGCCTCCTATGTCAAGTCATGCTGTTAGTTTACTTCTTGAAGCTGTTTTACTCAAGGCAAAATCATTGCAGACTCTTGGAAGGTTTCAAGATGCTGCTCGATCATGCAAGACTATTTTGGACACCATCGAATCTGCATTACCAGAAGGCTGGCCTGAAAACTTTGTTTTAGACACTAAATTACAAGAGACACTAACAAGTGCTGTAGAACTGCTTCCAGAGCTGTGGAAGCTTGCTGGCTCTCCTCAAGATGTAATATCATCATTTAGGAGGGCCTTGCTTTATCCCTGGAATCTTGACACTGAAACCACTGCAAGAATACAAAAGGAATTCGCTTTGTTTCTTTTGTACAGCGGCTGTGAGGCGAGCCCTCCCTCTCTTCGCTCCCAATTGGATGGTTCCTTTGTGCCAAGAAACAACACAGAAGAGGCTGTTCTCCTGCTTCTGATTCTGCTTCGAAAATCTGTTCTTGGAAGCATTGAATGGGACCCTTCAATAATTGATCACCTTTCCTTTGCTCTAAGTGTTTCTGGGGAGTTCAAGACACTGGCTCAACAGTTTGAGGAATTGCTTCCAGAAACCATGGACAGAAAAGAAATATATTATACTTTAGCTCTTTGTTACTATGGAGAAGGTGAGCACATGATTGCTTTGGATCTTCTGAAGAACTCTTTGAATAATAGGGAGAACTCGGAATGCACACAGGAATTGCTTCTAGCTTCAAGAATATGTGCAGACAAGAAGTTTTGTGTTCAGGATGGAATCAAATATTCTTGCAATGCCATTTCTCAATTGCATGAAAAGTGCACGCAATTGGTAGCTATTGCAAATTGCTTGCTAGGTGTTCTACTCTCATCAAAATCCAAGTCGGTTGCTTCTGATTCAGAGAAAGCTTTCATGCAACATCTTGGTGGCCAATCATCTTCAATTGTTAGAAGCCTTCTCACTGATGCACTAAGGCTTGACAGAACAAACCCATCTGCATGGTACAATCTAGGACTGCTTTACAAAGCTGATTTGGGGACATCAGCACTTGAAACTGTTGAGTGCTTTGAGGCAGCAGCTCTCCTTGAAGAATCTTCTCCCATTGAACCCTTCAGATAG 1581 0.4149 MFDDDSGKYQVECGSMRIFKSWISERKFSIRERLRKMMIKCICSGEQVVVDEICYSSESLATRDYSASASGYSSRPGGETDTKMDNSNIEEAESTLRESGYLNYEEARALLGRLEYQKGNFEAALYVFEGIDIAAVTPKMKVSISRRCETNRRRSQSDAVPPMSSHAVSLLLEAVLLKAKSLQTLGRFQDAARSCKTILDTIESALPEGWPENFVLDTKLQETLTSAVELLPELWKLAGSPQDVISSFRRALLYPWNLDTETTARIQKEFALFLLYSGCEASPPSLRSQLDGSFVPRNNTEEAVLLLLILLRKSVLGSIEWDPSIIDHLSFALSVSGEFKTLAQQFEELLPETMDRKEIYYTLALCYYGEGEHMIALDLLKNSLNNRENSECTQELLLASRICADKKFCVQDGIKYSCNAISQLHEKCTQLVAIANCLLGVLLSSKSKSVASDSEKAFMQHLGGQSSSIVRSLLTDALRLDRTNPSAWYNLGLLYKADLGTSALETVECFEAAALLEESSPIEPFR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1412 526 Gene3D Tetratricopeptide repeat domain 81 522 IPR011990 GO:0005515
Dod06g1412 526 MobiDBLite consensus disorder prediction 67 86 - -
Dod06g1412 526 MobiDBLite consensus disorder prediction 67 83 - -
Dod06g1412 526 PANTHER OS10G0471400 PROTEIN 459 526 - -
Dod06g1412 526 PANTHER PROTEIN NPG1 459 526 IPR043376 -
Dod06g1412 526 PANTHER OS10G0471400 PROTEIN 30 460 - -
Dod06g1412 526 SUPERFAMILY TPR-like 106 496 IPR011990 GO:0005515
Dod06g1412 526 PANTHER PROTEIN NPG1 30 460 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1412 Dod-Chr6 18839903 18843712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1412 454 526 Calmodulin-binding Proteins AT4G28600 50.667 8.21e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1412 K21843 - gmx:100789469 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1412 06 18839903 18843712 Dod06g1412 06 18839903 18843712 ECH