Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1408 ATGATTAAGGACAAAGAGTACGATGTTTTTATTAGCTTCAGAGGAGAGGACACCCGAACCAACTTCACTAGCCACCTTCATTCCGCACTCAAACGAGCAGGAATCAAGACATACATAGATGATGAGGCCCTTGAAAAGGGAGATGATATTCAGCCATCACTGTCCCAGGCAATATGGCATTCCAGTGTAGCGGTCGTGGTGTTCTCCAAGAACTATGCATCCTCAAAATGGTGCTTGCAAGAACTTGACGAGATAATTCACTGTAGAAGAGATATGGGGCTGGTAGTTATACCTGTGTTCTACGAGGTGGATCCCTCAGACATACGAAACTGGAGAGGGGCATTCGGGGAAGCGTTGGCAAAGCATGAAAAAGAATTGCGCTTTTCTCATGGTGACTCGAGTATAGTCCATTACACACTGCCTCGTTGGAAAGCTGCACTCACTGAAGCGGCCAATATATCTGGACGGGACACTCGTAGTCGTGAATACAAGAACGAGTCTCAAGTCATTGACAAAATCGTCGAAGATGTATTGCAAGCACTGGAGTTAAGGTTCCCTAATGAACCAATAGTACCCAGATTTGACATACTGCATAAAGACATCAAATTATTGCTGTCAAAAAACAAAAGTAGAAATGTCCAGGTAATTGGAATTTGGGGCATGGGTGGCATAGGTAAGACCACTATTGCTAAAGTCTTGTTTTCTCAACTCCTCCGTGGATACGATGGTGTTTGCTTCTTGGAAAATGTAAGAGAAGCATCACAAAATGTAGGACAAAGCAAACTTTCATCTTTACGTGAGAAGCTACTTTCTGAGCTACTAAAGGATGAACATATGAAGTCTACAACACCCACATTCATCAGGAGGAGACTTCGCAGTAAAAAGGTTTTCATTGTACTTGATGATGTGGATAAAGCAGAACAACTAGAAGTATTGTTTGAAGAGTGCAGTTATGCAGGTCCAGATAGTAAGCTCATCATAACATCAAGAAATAAGCATTTACTTAGGGGAATAGCTGATGAGGATGATATATATGAGGTCAAGACATGGAACTTCCAGGAATCTCTAGAGTTGTTTTGTTTGATTGCCTTCAAAGGCAGGCATCCCAAGAAAGGATATGAGGATCTTGCTAAAAGGGCAGTTCTTTATGCAGGGGGTGTTCCATTAGCTTTGAAAGTTTTGGGTTCGAATCTTCGTAACAGGAATCCTGAATTTTGGGTCAGTGAATTGAATAAAGTCAAGGATTATCCATATGATGGAATTCATAATGTGCTACGCATGAGCTATGATGGACTACACATTCTAGAGAAAAAGATATTTCTGGACATCGCATTTTTTTTCAAAGATGAAAATAAAGATTTTGTGGAAAGGATACTAAATGCCTGCGGTTTCTTTGCTACCAGTGGATTAAAGATCCTTGAAGATAAAGCTCTTATAACTATTTCAGGTGGCAAGAGAATACAAATGCATGACTTAATACAAGATATGGGTTTAAGTATAGTTCGTCAAGACATTGGAGACCCTGGAAAACGTAGCAGATTGAAGGATATTGAAGAAGTTTCTGATGTGCTTGAATATAAAAAGAAGGGGAGTGATGCAGTCGAAGGCATAAAATTAGATCTATCTCAAATTGATGATTTGCGATTGCATGCAAATGCATTTAGCATGATGACTGATTTAAGATTTCTAAAATTATATATCCCCTTTGGTAAGACAATGGGTAACATGGACTATCCTATAGCCCACAACAAATTTTTGGGCAAGTTGAGGTATCTTGAATGGCATGGATACTGTTTGAAGTCTCTTCCAGGCACTCTTTGTACCAAGATGCTTGTTGAGATTCGCATGCCGCATAGTCATATTATAGAACTCTGGCATGGGGTTAAGGTAATTGATCTAAGTGAATGCAAACAATTAGAGAATCTCCCAGATTTGTCCAAGGCATCTAGGCTTAAATGGGTGAATCTTACTGGTTGTGAGAGTTTGGCTGAGCTTCATCCATCTATTTTATCTCTTGATACACTTGAAACTTTGATGCTAGATGGTTGCAAAAAACTCAGCAGTCTAAAAGGTGAGAAGCATTTAAGATCTTTGAAGAAGATCAGCGTCAGCGGCTGCCTAAGTCTCAAGGAATTTTCACTGTCGTCCGATGGTATGGAAAGCTTGGATCTAACCAATGCTGGAATAGTAGAGTTGCACTCATCAATTGGGCGGTCAAGCAAGCTTAGGTGGCTTAATCTTGAGTGTTTAGGACTTCAGAATCTTCCACATGAGCTATCATTCCTAAGATGGCTTGGGGAGCTTAGAATTTCTAATTGCAGTCTACTAGTACTTGAAAAACAGAAGCTGCATGCCTTATTTGCCGGCTTAAGATTTCTACGGTTAGTATATTTGAAGGATTGTTGTAACTTGTTTGAACTCCCTGATAACATCAGCATCTTATCCCATTTACATGAGTTGGGATTAGATGGAAGCAATGTAGAGACATTACCTGCAAGCATCAAGCATCTGTTCAATTTGGAAATTCTGTCATTAAGGAATTGCAAGAACCTTAAGAGCCTACCTAAGCTTCCGGCACGTATCAGAGGGCTTTATGTTGTTAAATGCACGTCCTTGGTGACAATATCCGCTATGGAGACTTTTGCAGAAGTGATAATAGGAAAGGTGAAATACATCTCGTTTGAGAATTGCATGAAACTGGATGAATCTTCACGCCATCGAATCATGGAAGGTGCCCAGTTAATAGCAATGGATGTAATGATTAAAAATGTGGATGCGAAGGTTTGTTTACCAGGAAACACTGCACCTGCACCGGGCCGTATCGTTTGGTATGAACTCACGCATCACTGTCAGACTCAGCCTGCTGTGGGACCTCGCTCATTTACCTATAATTTGTTGAAGGTTTGTTCACCAGGAAGCAATGTTCCAAAGCAGTTCACATATCGAACCACCGAGCCCTGTTTCCCTGTTATACTCCCTTCCCACTCCGTGGTGCTGGGGTTAATTTTGTGTGTGGTTCTTTCTCCACTTGATGAAATGAAGGAGGATGGTGCTAAAATCTTCTGTCAGTTATATGAGGAAGACGGTACAAAGGTCGGGTACCCTAGTAGGTGGTCTCATGAACCTATCCGGGATTTGAATGGTGATCATGTTTGCATATGGAATGACCCATTTCTTTTTAATAGGTCTTTTAGAGACTATGAACAACATATTACTGTTGAGTTCTATGCTACAAATGATTCGGGAATACGTGATGTATTGAAAATTGGTATCAAAGAGTGTGGGGCAAAACTAATTTTTGTCTCAGTCACACCCGAGTCAACCAGTTCGCGAATTTTTGACTCGGACCCGCCCAAGCTACCCAGTTGTTTGCAGGAGCGGGACTCTGATTCTAAGTCCATTCGGAAGTTGGCATTAAAGTTGGGGAGAATGATCTCGCTTCAAAGGGAGAGAAAGTGA 3459 0.4102 MIKDKEYDVFISFRGEDTRTNFTSHLHSALKRAGIKTYIDDEALEKGDDIQPSLSQAIWHSSVAVVVFSKNYASSKWCLQELDEIIHCRRDMGLVVIPVFYEVDPSDIRNWRGAFGEALAKHEKELRFSHGDSSIVHYTLPRWKAALTEAANISGRDTRSREYKNESQVIDKIVEDVLQALELRFPNEPIVPRFDILHKDIKLLLSKNKSRNVQVIGIWGMGGIGKTTIAKVLFSQLLRGYDGVCFLENVREASQNVGQSKLSSLREKLLSELLKDEHMKSTTPTFIRRRLRSKKVFIVLDDVDKAEQLEVLFEECSYAGPDSKLIITSRNKHLLRGIADEDDIYEVKTWNFQESLELFCLIAFKGRHPKKGYEDLAKRAVLYAGGVPLALKVLGSNLRNRNPEFWVSELNKVKDYPYDGIHNVLRMSYDGLHILEKKIFLDIAFFFKDENKDFVERILNACGFFATSGLKILEDKALITISGGKRIQMHDLIQDMGLSIVRQDIGDPGKRSRLKDIEEVSDVLEYKKKGSDAVEGIKLDLSQIDDLRLHANAFSMMTDLRFLKLYIPFGKTMGNMDYPIAHNKFLGKLRYLEWHGYCLKSLPGTLCTKMLVEIRMPHSHIIELWHGVKVIDLSECKQLENLPDLSKASRLKWVNLTGCESLAELHPSILSLDTLETLMLDGCKKLSSLKGEKHLRSLKKISVSGCLSLKEFSLSSDGMESLDLTNAGIVELHSSIGRSSKLRWLNLECLGLQNLPHELSFLRWLGELRISNCSLLVLEKQKLHALFAGLRFLRLVYLKDCCNLFELPDNISILSHLHELGLDGSNVETLPASIKHLFNLEILSLRNCKNLKSLPKLPARIRGLYVVKCTSLVTISAMETFAEVIIGKVKYISFENCMKLDESSRHRIMEGAQLIAMDVMIKNVDAKVCLPGNTAPAPGRIVWYELTHHCQTQPAVGPRSFTYNLLKVCSPGSNVPKQFTYRTTEPCFPVILPSHSVVLGLILCVVLSPLDEMKEDGAKIFCQLYEEDGTKVGYPSRWSHEPIRDLNGDHVCIWNDPFLFNRSFRDYEQHITVEFYATNDSGIRDVLKIGIKECGAKLIFVSVTPESTSSRIFDSDPPKLPSCLQERDSDSKSIRKLALKLGRMISLQRERK* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1408 1152 Gene3D - 3 177 IPR035897 -
Dod06g1408 1152 PANTHER NB-ARC DOMAIN PROTEIN 6 926 - -
Dod06g1408 1152 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 926 IPR044974 GO:0006952
Dod06g1408 1152 Pfam NB-ARC domain 203 406 IPR002182 GO:0043531
Dod06g1408 1152 ProSiteProfiles TIR domain profile. 5 181 IPR000157 GO:0007165
Dod06g1408 1152 SMART till_3 6 153 IPR000157 GO:0007165
Dod06g1408 1152 Gene3D Ribonuclease Inhibitor 716 909 IPR032675 -
Dod06g1408 1152 Gene3D Ribonuclease Inhibitor 535 715 IPR032675 -
Dod06g1408 1152 Gene3D - 178 346 IPR027417 -
Dod06g1408 1152 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Dod06g1408 1152 SUPERFAMILY L domain-like 488 876 - -
Dod06g1408 1152 Pfam TIR domain 7 184 IPR000157 GO:0007165
Dod06g1408 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 443 IPR027417 -
Dod06g1408 1152 PRINTS Disease resistance protein signature 835 851 - -
Dod06g1408 1152 PRINTS Disease resistance protein signature 384 398 - -
Dod06g1408 1152 PRINTS Disease resistance protein signature 290 304 - -
Dod06g1408 1152 PRINTS Disease resistance protein signature 215 230 - -
Dod06g1408 1152 Gene3D - 351 433 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1408 Dod-Chr6 18760643 18766714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1408 5 820 WRKY Transcription Factor Family AT4G12020 32.067 5.91e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1408 - - ahf:112709325 1286.94