Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1406 ATGTATCCTTATCGCAAAGATTTCGATGCTTTTATCAGCTTCAGAGGTGAGGACACCCGCGCAACCTTCACTAGCCACCTTCATTCCGCACTCAAACGAGCAGAAATCAAGATGTACATTGATGATGAGTGCCTTGAAAAAGGATATGATGTTCGGTCATCTCTGATCGACGCAATCAGAAGATCCCATGTGGCGGTCGTGGTGTTCTCCAAGAACTATGCATACTCAAAATGTTGCTTGCAGGAGCTCCTCGAAATAATTCGCTGTAGAAGAAACATGGGGCTGGTAGTTATGCCTGTGTTCTATGAGGTTGATCCCTCAGACATAAGAAACCAGACAGAGACATACGGGGAGGCTTTGGCAAAACATAAACAAGAATTGTGGTTTCATTGCGACAATGACTCGGAGACGGTCCATGACACACTGCTCCGCTGGGAAGCTGCACTCGCTGAAGTGGCCAATATATCTGGACGGGACACTCGTAGCTGTGAATACAAAAACGAGTCACATGTCATTGACAAAATTGTTGAGGATGTGTTGCAAATGCTGGAGTTAAGGTTCCCTAATGAACCAAGACTACTTTCTGAGCTACTAAAGGACAAACATCTGAACTCTACAGCACCCACATTCACCAGAAGGAGGCTCAATAGTAAAAGGGTTTTCGTTGTACTTGATGATGTGGATAAAGCAGAGCAAGTAGAAGTATTGTTTGGAGAGTGTAGTTATGCGGGTCCAAATAGTAAGCTCATTATAACAACAAGAAATAAGCATTTACTTAAGGGAATAGTTGACGAGGATGATATATATGAGGTCAAGACATGGAGCTTTGAGGAATCTCTAGAGCTGTTTTGCTGGATTGCCTTCAAAGACAGGCATCCCATGAAAGGATATGAGGATCTCTCTAAAAGGGCAGTTGATAATGCTAGGGGTGTTCCATTAGCTCTGAAAGTTTTGGGTTCAAATCTCCGTGACACAAGTGCTGAATTATGGGACAGTGAATTGAATAAAGTCAAGGATTATCCCTATGATGGCATTAAGAATGTGCTGCGCGTGAGCTACGATGGACTACACATTCTAGAGAAAAAAAAATTTCTGGACATTGCATTCTTTTTCAAAGGTGAAAACACAGATTTCGTGGAAAGGATACTAAATGCCTGCGGTTTCTTCGCTACAAGTGGATTAAAGATCCTTGAAGATAAAGCTCTTTTATAA 1212 0.4233 MYPYRKDFDAFISFRGEDTRATFTSHLHSALKRAEIKMYIDDECLEKGYDVRSSLIDAIRRSHVAVVVFSKNYAYSKCCLQELLEIIRCRRNMGLVVMPVFYEVDPSDIRNQTETYGEALAKHKQELWFHCDNDSETVHDTLLRWEAALAEVANISGRDTRSCEYKNESHVIDKIVEDVLQMLELRFPNEPRLLSELLKDKHLNSTAPTFTRRRLNSKRVFVVLDDVDKAEQVEVLFGECSYAGPNSKLIITTRNKHLLKGIVDEDDIYEVKTWSFEESLELFCWIAFKDRHPMKGYEDLSKRAVDNARGVPLALKVLGSNLRDTSAELWDSELNKVKDYPYDGIKNVLRVSYDGLHILEKKKFLDIAFFFKGENTDFVERILNACGFFATSGLKILEDKALL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1406 403 PANTHER NB-ARC DOMAIN PROTEIN 192 402 - -
Dod06g1406 403 PANTHER NB-ARC DOMAIN PROTEIN 12 184 - -
Dod06g1406 403 Gene3D - 275 357 IPR042197 -
Dod06g1406 403 Pfam TIR domain 8 188 IPR000157 GO:0007165
Dod06g1406 403 Pfam NB-ARC domain 209 343 IPR002182 GO:0043531
Dod06g1406 403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 192 402 IPR044974 GO:0006952
Dod06g1406 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 367 IPR027417 -
Dod06g1406 403 ProSiteProfiles TIR domain profile. 6 183 IPR000157 GO:0007165
Dod06g1406 403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 184 IPR044974 GO:0006952
Dod06g1406 403 SMART till_3 7 155 IPR000157 GO:0007165
Dod06g1406 403 Gene3D - 4 187 IPR035897 -
Dod06g1406 403 PRINTS Disease resistance protein signature 308 322 - -
Dod06g1406 403 PRINTS Disease resistance protein signature 214 228 - -
Dod06g1406 403 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1406 Dod-Chr6 18728428 18730229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1406 206 403 WRKY Transcription Factor Family AT5G45050 37.500 9.80e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1406 - - adu:107466258 489.96