Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1368 ATGGATTCCTCTTCCCTCTTCTTCAATTCCTCCACTTCTGAATTCTCCTCAGATCACTCTTCCTCCTGCTCCTCTTTTGGCTCCTCCCCAGAGTCATTCTCGTTTAACTGGGACCATTATCTCCCGTTCAACGAGAATGATCCTGAGGAGATGCTCCTCTACGGCATGATCGCCAAGGCCAACACTCCTCATCAGCAGCCCTTTGAGCCTGCCAAGAGGGTCAAGGAAGAGGAGGTCAGTTCTGATGGCGATAATGCCGGATCAAGGAAGGAGAAGTCATACCGAGGCGTCAGGAGAAGGCCATGGGGCAAGTTTGCAGCCGAGATAAGGGACTCGACGAGGCACGGCATAAGGGTATGGCTGGGGACATTTGATAGTGCTGAAGCAGCGGCTCTGGCTTATGATCAAGCTGCTTTTTCCATGAGGGGGTCTGCGGCGATTCTCAATTTCCCAGTTGACACTGTCAGGGAATCGCTTAGGGAGATGAACTGTGGTAGTGGAGCTGAAGAAGGGTGCTCCCCTGTTGTTGCCCTGAAGAGGAAGCACTCACTGAGGAGGAAAATTGGTGTCAAGAAGAACAATAAGGAGAGTGATGTCAGTAATGTTAGGATAGACAATGCAGTGGTGTTTGAGGATCTAGGCCCTGATTACTTGGAACAATTGTTGATGTCATCTGATAAGATTCCTACTGCTTGGTGA 699 0.5007 MDSSSLFFNSSTSEFSSDHSSSCSSFGSSPESFSFNWDHYLPFNENDPEEMLLYGMIAKANTPHQQPFEPAKRVKEEEVSSDGDNAGSRKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVDTVRESLREMNCGSGAEEGCSPVVALKRKHSLRRKIGVKKNNKESDVSNVRIDNAVVFEDLGPDYLEQLLMSSDKIPTAW* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1368 232 MobiDBLite consensus disorder prediction 69 92 - -
Dod06g1368 232 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 MobiDBLite consensus disorder prediction 1 31 - -
Dod06g1368 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 35 224 - -
Dod06g1368 232 MobiDBLite consensus disorder prediction 64 93 - -
Dod06g1368 232 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 PANTHER DNA-BINDING DOMAIN 35 224 IPR044808 GO:0003700|GO:0009873
Dod06g1368 232 SUPERFAMILY DNA-binding domain 93 153 IPR016177 GO:0003677
Dod06g1368 232 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 CDD AP2 92 153 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Dod06g1368 232 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1368 Dod-Chr6 18112894 18113592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1368 41 226 AP2-EREBP Transcription Factor Family AT3G23240 61.856 1.71e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod06g1368 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1368 K14516 - gmx:100804481 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1368 06 18112894 18113592 Dod06g1368 06 18112894 18113592 ECH