Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1367 ATGGATCAGGACCACCACAAGGGGAAGCAGGGCAAGGAGGAGAAGGCGAGGGAAGAGGTCCGGTACCGCGGGGTGCGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATTAGAGATCCATCAAAGCAAGGGGCCAGGCTGTGGTTGGGGACCTTTGACACTGCCGAAGAAGCGGCTAGAGCTTATGACCGTGCAGCCTTTAACATGAGGAATCATCTTGCAATTCTCAATTTCCCTAATGAGTACTATTCTCAAATAAGGGGGTCACCACCTTATCCACCACATTTGGCGACACCCTCTTCTTCCTCTCCACACCCTCATCATGCTAGTGGCGGTTCTAGTTCTTCTGGTCCTCACCAAAGGGAGGTTATTGAGTTCGAGTGCGTGGATGGTCACGTGTTGGAGGCTCTTCTTGAGTCGGAGGAGCAGAAGAAGAAAAAGTAG 444 0.5405 MDQDHHKGKQGKEEKAREEVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNMRNHLAILNFPNEYYSQIRGSPPYPPHLATPSSSSPHPHHASGGSSSSGPHQREVIEFECVDGHVLEALLESEEQKKKK* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1367 147 MobiDBLite consensus disorder prediction 101 120 - -
Dod06g1367 147 PANTHER ETHYLENE RESPONSE FACTOR 4 142 - -
Dod06g1367 147 MobiDBLite consensus disorder prediction 84 122 - -
Dod06g1367 147 MobiDBLite consensus disorder prediction 1 21 - -
Dod06g1367 147 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 PANTHER DNA-BINDING DOMAIN 4 142 IPR044808 GO:0003700|GO:0009873
Dod06g1367 147 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Dod06g1367 147 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Dod06g1367 147 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1367 Dod-Chr6 18055028 18055769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1367 19 145 AP2-EREBP Transcription Factor Family AT3G23230 62.992 1.45e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod06g1367 AP2 4.5e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1367 - - cit:102611827 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1367 06 18055028 18055769 Dod06g1367 06 18055028 18055769 ECH