Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1366 ATGGATGAAGAAGGATCATCAAGGGGAAGGACCAAGGATGACGGCGGAGATGTTCGGTACCGGGGCGTGCGCCGGCGGCCATGGGGGAAGTTCGCGGCCGAGATTCGCGACTCCAACAGGCAAGGTCAGAGGGTTTGGCTTGGAACTTTCAACACTGCTGAGGAAGCTGCCAGAGCATATGATAGAGCTGCTTATGCCATGAGAGGCTCATTTGCAATCCTCAACTTCCCAAATGAATATCCTATGTCAACTGGCGGCGGCAGTGGTGGCGGAGGTGGTGGCGGCTCTCATTCCTCCGGTGCTTCATCATCATCCTCACCATCTACTTCAAGGCATGGAAATGTGGAAGGCAGAGGAAGGAGTGAGCAAGGGAGACCAGTGTTCGAGTTTGAGTGCTTGGATGACAAACTGCTGGAGGATCTTCTTGCTTGTGAAGAGAAAAAGAAAAAGGGACCCTGA 459 0.5338 MDEEGSSRGRTKDDGGDVRYRGVRRRPWGKFAAEIRDSNRQGQRVWLGTFNTAEEAARAYDRAAYAMRGSFAILNFPNEYPMSTGGGSGGGGGGGSHSSGASSSSSPSTSRHGNVEGRGRSEQGRPVFEFECLDDKLLEDLLACEEKKKKGP* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1366 152 MobiDBLite consensus disorder prediction 95 114 - -
Dod06g1366 152 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Dod06g1366 152 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Dod06g1366 152 PANTHER ETHYLENE RESPONSE FACTOR 16 146 - -
Dod06g1366 152 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Dod06g1366 152 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Dod06g1366 152 PANTHER DNA-BINDING DOMAIN 16 146 IPR044808 GO:0003700|GO:0009873
Dod06g1366 152 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Dod06g1366 152 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Dod06g1366 152 MobiDBLite consensus disorder prediction 76 126 - -
Dod06g1366 152 MobiDBLite consensus disorder prediction 1 23 - -
Dod06g1366 152 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Dod06g1366 152 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1366 Dod-Chr6 18043489 18044374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1366 14 149 AP2-EREBP Transcription Factor Family AT3G23230 56.618 5.59e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod06g1366 AP2 1.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1366 - - gmx:100775830 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1366 06 18043489 18044374 Dod06g1366 06 18043489 18044374 ECH