Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1363 ATGGATCCCTTCGACGATTTCTTTGATTTCGATTTCATCCATGATTCTCCGCCAGCCCCCACCGATTTCCTTTGGCCCGATCAAAGTGTGAGCACTGAAATAGTTTTTTCAGGTAGTGATGCTGCTGCCTGTCAAGAGAACACCAGGAGGAGGGGGCGCACTAGTTCGTGTTGCAAGGCAGGAACGAAGGCTCGCCGTGAGAAGTTGCGGAGGGAGAGACTCAATGAAAGGTTTTGTGACTTGAGCTCTGTTTTAGAACCTGGGAGGCCTGTGAAAACTGATAAAATGGCTATACTTGATGATGCTATCAGAGTCTTGAACCAACTAAAAGTTGAAGCTCAGGAACTCAAAGAAACAAATGAAAAATTATTAGAGGAAATAAAATGTTCAAAGGAGGAGAAAAATGAACTTCGCGAAGAGAAACTTGTTCTGAAAGCAGATAAAGAAAGGATTGAGAGGCAGTTGAAAGATTTGCCCGTTCCACCTGCAGGGTTTATGCCTCCGAATCTAGCTGCTTATCAAGCAGGGGTCAACAAGGTGGCTGTTTTTCCAAACTATGGTTATATCCCAATGTGGCAATATCTTCCTCCATCGGCCCGTGATACATCCCATGATCATGAGCTCAGGCCCCCTGCTGCATAG 642 0.4548 MDPFDDFFDFDFIHDSPPAPTDFLWPDQSVSTEIVFSGSDAAACQENTRRRGRTSSCCKAGTKARREKLRRERLNERFCDLSSVLEPGRPVKTDKMAILDDAIRVLNQLKVEAQELKETNEKLLEEIKCSKEEKNELREEKLVLKADKERIERQLKDLPVPPAGFMPPNLAAYQAGVNKVAVFPNYGYIPMWQYLPPSARDTSHDHELRPPAA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1363 213 Gene3D - 56 122 IPR036638 GO:0046983
Dod06g1363 213 Pfam Helix-loop-helix DNA-binding domain 62 109 IPR011598 GO:0046983
Dod06g1363 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 109 IPR011598 GO:0046983
Dod06g1363 213 Coils Coil 99 154 - -
Dod06g1363 213 PANTHER TRANSCRIPTION FACTOR BHLH104 6 213 - -
Dod06g1363 213 PANTHER BHLH TRANSCRIPTION FACTOR 6 213 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Dod06g1363 213 SMART finulus 64 115 IPR011598 GO:0046983
Dod06g1363 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 123 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1363 Dod-Chr6 18015923 18018375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1363 35 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 63.298 7.28e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g1363 HLH 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1363 - - aip:107617845 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1363 06 18015923 18018375 Dod06g1363 06 18015923 18018375 ECH