Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1353 ATGGAGATAGCAGGTGGCGCTGATGTGGCAGAGAGCGTGGCGCAGTTCGCCAGGAGGCGACAGCGCGGGGTTTGTGTGCTCAGCGGGAGTGGATCGGTGGCTAACGTTACCCTGAGACAACCCGCAGCACCTGGTGCCGTGGTGGCCCTTCATGGAAGGTTCGAGATCCTGTCCCTAACCGGGGCGTTTCTTCCTGGTCCTGCCCCTCCGGGATCCACGGGGTTGACCGTGTATCTCGCGGGAGGACAGGGCCAGGTTGTTGGAGGGAGTGTTGTTGGGTCACTTGTGGCTGCTGGGCCTGTTATGGTCATTGCTGCCACTTTTGCTAATGCAACTTATGAGAGGCTGCCACTTGATGATGATGATGAGGGCCCTAGTGGTGGTGGTGTGTCGGCAGGTGGAGGAGGAGGCAGTGGATCGCCGCCTCCTCCGGGGATTGGAGGCGGCGGAGGGGGTCATCATCATCATCATCATCATCAGCTGCAGGCTGCTGGCCTTCCGGATCCATCATCTTTGCCTTTGTATAACATGCCACCAAATCTGATGGCTAATGGAGGAGGGCATCAAGTGGGGCATGAGGCTTTTGCTTGGGCTCAAGGACGGCCACCTTACTGA 615 0.5886 MEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGPSGGGVSAGGGGGSGSPPPPGIGGGGGGHHHHHHHQLQAAGLPDPSSLPLYNMPPNLMANGGGHQVGHEAFAWAQGRPPY* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1353 204 Gene3D - 1 123 - -
Dod06g1353 204 PANTHER DUF296 DOMAIN PROTEIN 1 204 - -
Dod06g1353 204 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 109 IPR005175 -
Dod06g1353 204 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 120 - -
Dod06g1353 204 ProSiteProfiles PPC domain profile profile. 1 131 IPR005175 -
Dod06g1353 204 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 204 IPR014476 GO:0003680
Dod06g1353 204 PIRSF ESCAROLA 1 204 IPR014476 GO:0003680
Dod06g1353 204 CDD DUF296 2 80 IPR005175 -
Dod06g1353 204 MobiDBLite consensus disorder prediction 116 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1353 Dod-Chr6 17886474 17888160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1353 1 204 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.107 2.14e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1353 - - pop:7467535 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1353 06 17886474 17888160 Dod06g1353 06 17886474 17888160 ECH