Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1352 ATGTTAAAAGCAGTGGCATCTGGGTTGTTGATCTCTTCCCTCATCATTTGTGTATCTGCAACAGATAATGGATTTCCTAGATGTAACTGTGATGATGAGTCCAGCTTGTGGACTATTGAGAGCATTTTGGAGTGCCAGAGAGTTGGGGATTTCTTGATTGCTGTGGCATACTTCTCCATCCCTATTGAGCTGCTTTATTTCATTAGTTGCTCAAATGTGCCATTCAAATGGGTCCTTATTCAGTTCATTGCCTTCATTGTATTGTGTGGATTGACACATTTGCTCAATGGTTGGACTTATGGTCCTCACACTTTTCAACTTATGGTGGCACTCACTGTCTTCAAAATTCTCACCGCCTTGGTGTCATGCGCCACAGCTATAACGCTCATTACTCTGATTCCTTTGCTTCTCAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGGCCAGGGATCTTGGAAGGGAGGTTGGCATTATAATGAAACAGAAGGAGGCTGCATTGCATGTGAGGATGCTTACTCGAGAGATTCGCAAGTCACTCGATAGACATACGATTCTGTACACCACCTTGGTTGAGCTGTCGAAAACACTAGGATTGGAAAACTGTGCAGTGTGGATGCCTAATGTTGACAGGACAGAGATGAACCTCACTCACGAGTTGAATACGAGGAATTTTAACTTTTCTATACCCATTACTGATCCAGATGTTGTTAGAATTAAGGGAAGTGACGGGGTCAATATACTTAGCCCTGACTCAGCACTTGCCGGTGCAAGTAGTGTGGTTTCTGGTGAGGTGGGACCAGTTGCTGCAATCCGAATGCCAATGCTACGAGTTAGTAATTTCAAAGGAGGAACGCCTGAGCTAGCCCAGGCATGTTATGCAATATTGGTCTTGATTCTTCCTGCTGCGGAGACCAGAACTTGGGGCAATCAGGAGCTGGAGATAATTAAGGTTGTGGCTGATCAGGTTGCGGTGGCTTTATCTCATGCTGCAGTTCTCGAAGAGTCACAACTTATGAGAGAGAAGTTGGAGGAGCAAAATCGAGCTTTGCAACAGGCAAGAAGAGACGCTATGATGGCAAGTCAGGCAAGAAACTCGTTTCAGAAAGTCATGAGTGATGGAATGAGGAGGCCTATGCACTCTATTTTGGGATTGCTTTCATTGATACAAGATGATAATTTGAAGAGTGAACAGAAACTCATCGTGGATGCAATGCTACGGACCAGCAATGTCCTGTCAAACTTGATAAATGATGCCATGGACAGCTCCGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGGTCTTTTGGGTTACATTCCATGATTAAGGAAGCAGCTTGCCTTACCAAGTGCATGTGTGTCTATAGGGGCATTGGCTTTGTCGTTGAGGTTGATAAGTCTTTGCCTGACAATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTAATTTTGCACATGGTTGGGAACCTACTGGATCGTAACCACGGGGAAGGGATTCTTGTACTTCGGGTTTTTGCAGAGACTGGAAGTCAGGGAAGGATTGACAAGGGGTGGACAACCTGGAGGCCAAGCTCATCTAGTGGTGATGTAAATATTAGATTTGAGATAGGGATCAACAGTAGTGATTCAGAAGTTGGGAGCTTGGTTTCTTCAGGACTTGGGGGTAGGAAATATTCTAGTGATAGGGCTGAGGGCAGATTAAGCTTCAACATTTGCAAGAGGATAGTTCAGTTGATGCAAGGGAACATACGGTTGGTACCAAATACTCATGGTTCTCCTCGCATGGCCCTTGTTCTTCGGTTTCAGCTGCGGCCGTCCATTAGCATAGCAATTTCAGAACCCGGAGAATCTTCAGAACATGCTAATTCGAATTCCATGTTGAGAGGTCTGCAAGTTCTATTGGCTGACAATGATGATGTAAATAGAGCAGTGACCCAAAAGTTGCTTCAGAAACTAGGTTGTGTTGTGGCTTCTGTTTCTTCAGGATTTCAATGCCTTACTGCTATTGGTCCTCCTGGATCTTCTTTCCAATTCATTCTTCTGGATCTTCAAATGCCTGATTTAGATGGCTTCGAAGTCGCCACGAGGATTCGGAAGTTCAGAAGCCGGAACTGGCCCATGATAGTAGCCTTGACTGCGAACACAGAAGAAGGTTTGTGGGAAAGATGCATGCAGATTGGTATAAATGGGGTTGTCCGGAAACCAGTTTTGTTGCAAGGGATTGCTAGTGAACTCAGAAGACTCCTGATGCAGGGAAATAATGTCCTGTGA 2277 0.4462 MLKAVASGLLISSLIICVSATDNGFPRCNCDDESSLWTIESILECQRVGDFLIAVAYFSIPIELLYFISCSNVPFKWVLIQFIAFIVLCGLTHLLNGWTYGPHTFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKARDLGREVGIIMKQKEAALHVRMLTREIRKSLDRHTILYTTLVELSKTLGLENCAVWMPNVDRTEMNLTHELNTRNFNFSIPITDPDVVRIKGSDGVNILSPDSALAGASSVVSGEVGPVAAIRMPMLRVSNFKGGTPELAQACYAILVLILPAAETRTWGNQELEIIKVVADQVAVALSHAAVLEESQLMREKLEEQNRALQQARRDAMMASQARNSFQKVMSDGMRRPMHSILGLLSLIQDDNLKSEQKLIVDAMLRTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLTKCMCVYRGIGFVVEVDKSLPDNVMGDERRVFQVILHMVGNLLDRNHGEGILVLRVFAETGSQGRIDKGWTTWRPSSSSGDVNIRFEIGINSSDSEVGSLVSSGLGGRKYSSDRAEGRLSFNICKRIVQLMQGNIRLVPNTHGSPRMALVLRFQLRPSISIAISEPGESSEHANSNSMLRGLQVLLADNDDVNRAVTQKLLQKLGCVVASVSSGFQCLTAIGPPGSSFQFILLDLQMPDLDGFEVATRIRKFRSRNWPMIVALTANTEEGLWERCMQIGINGVVRKPVLLQGIASELRRLLMQGNNVL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1352 758 Gene3D - 614 752 - -
Dod06g1352 758 PANTHER ETHYLENE RESPONSE SENSOR 2 11 755 - -
Dod06g1352 758 SMART gaf_1 182 338 IPR003018 GO:0005515
Dod06g1352 758 PIRSF Ethylen_sen_hybr_HK 1 758 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Dod06g1352 758 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 433 598 IPR036890 -
Dod06g1352 758 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Dod06g1352 758 Pfam His Kinase A (phospho-acceptor) domain 365 428 IPR003661 GO:0000155|GO:0007165
Dod06g1352 758 Gene3D - 162 329 IPR029016 -
Dod06g1352 758 ProSiteProfiles Histidine kinase domain profile. 371 605 IPR005467 -
Dod06g1352 758 SMART REC_2 632 751 IPR001789 GO:0000160
Dod06g1352 758 Gene3D - 330 427 - -
Dod06g1352 758 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 11 755 - -
Dod06g1352 758 SUPERFAMILY CheY-like 629 751 IPR011006 -
Dod06g1352 758 Pfam Response regulator receiver domain 634 741 IPR001789 GO:0000160
Dod06g1352 758 CDD REC_ETR-like 632 747 - -
Dod06g1352 758 Pfam GAF domain 182 328 IPR003018 GO:0005515
Dod06g1352 758 SUPERFAMILY GAF domain-like 185 331 - -
Dod06g1352 758 ProSiteProfiles Response regulatory domain profile. 633 751 IPR001789 GO:0000160
Dod06g1352 758 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Dod06g1352 758 Coils Coil 334 364 - -
Dod06g1352 758 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 430 IPR036097 GO:0000155|GO:0007165
Dod06g1352 758 CDD HATPase_ETR2_ERS2-EIN4-like 470 601 - -
Dod06g1352 758 Gene3D - 428 605 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1352 Dod-Chr6 17842152 17846121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1352 22 751 Miscellaneous Gene Families AT3G04580 57.930 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod06g1352 GAF 1.2e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1352 K14509 - gmx:100787425 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1352 06 17842152 17846121 Dod06g1352 06 17842152 17846121 ECH