Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1329 ATGTCGAAGAAATTTCAAGCCCAATTAGTGATCGGATTTTTGAGCTTTGTGACTCAGAATTGTTCCCAGAGGCACTTCAGAATTCCTGAGGTCACCTCAAGCTCAAATTGTTGCTATGAAGAGAACTCCTCATATGCCACAAACAACATATCTCTAGCATTAGATGTAGAAAACAAGTTCAACAACAATAATAATAACAATAGCAATAGCAATAACACAGTCACCACCCCAAGTAGCACCACCACCACAAACAACAACACAACCAACAGTAGTAACCTCTCCATCATCTTTGACTCCCAAGAAGAGCTTGACAATGACATCTCAGCCTCCATAGACTTCTCATCATCCCCAGCATTCAATGTTCCGCCATTTCTTCCGGTCACAAACCAGCAAGAACAACAGTTTGACTTCTCTTCTGTGCATCAGCAGCCTCATCATCAGGTGCAACTAGCAGCATGTCCAGTTGTGGAGGGCTTCTCTCAGTTTCCCACTGACACTGTTGCACCCCTCATGGGGGCTCCATTGCCTTCTGTTTTTGAAGAGGATTGCATAACTTCTGTGCCTTCTTATGTGCCTCTCAACCCTTCTTCTCCTTCTTGCTCTTATCTCAACCCTGGCATGGCACCGTACATGCCTCCTGGTCCTCTTGGCACTGCCTTATCGGCTGACCGTGCCAGTTTGTTTGGTGGGAGCATGCTTCTTGGTTCTGAGCTTCAGAGGCAAGAGCTTGACTACCAAGGAGAAAATGGTGGAATATATTGTACAGATTCAATTCAGCGGGTGTTTACCCCTCAAGAACTTCAGGCACTTAGTACTGAGAGTCAGCAACTAGTGGCTGGAGCTGGGAGTTCTGCCACTTTGACACCTGAAATCTCAAACTTGGAGGACTCTAGCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCACAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTTGCAGATAGCCGGCCTCGGGTTAGAGGAAGATTTGCTAAAAATGATGACTTTGGAGATACTCATAGACCTGCTAGTAGCAACCATGAAGAAGAAGATGAAGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGGGTGAATTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1224 0.4387 MSKKFQAQLVIGFLSFVTQNCSQRHFRIPEVTSSSNCCYEENSSYATNNISLALDVENKFNNNNNNNSNSNNTVTTPSSTTTTNNNTTNSSNLSIIFDSQEELDNDISASIDFSSSPAFNVPPFLPVTNQQEQQFDFSSVHQQPHHQVQLAACPVVEGFSQFPTDTVAPLMGAPLPSVFEEDCITSVPSYVPLNPSSPSCSYLNPGMAPYMPPGPLGTALSADRASLFGGSMLLGSELQRQELDYQGENGGIYCTDSIQRVFTPQELQALSTESQQLVAGAGSSATLTPEISNLEDSSFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEEDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1329 407 ProSiteProfiles CCT domain profile. 309 351 IPR010402 GO:0005515
Dod06g1329 407 PANTHER CCT MOTIF FAMILY PROTEIN 15 407 - -
Dod06g1329 407 MobiDBLite consensus disorder prediction 347 374 - -
Dod06g1329 407 Pfam CCT motif 309 351 IPR010402 GO:0005515
Dod06g1329 407 MobiDBLite consensus disorder prediction 347 366 - -
Dod06g1329 407 MobiDBLite consensus disorder prediction 61 88 - -
Dod06g1329 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 15 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1329 Dod-Chr6 17643209 17645632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1329 309 367 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 3.06e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod06g1329 CCT 5.3e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1329 - - aprc:113871720 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1329 06 17643209 17645632 Dod06g1329 06 17643209 17645632 ECH