Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1315 ATGTATTGGGGAGTTATGGCTGGAAACATGGGTTGGGGTGTCATAGAAGAGGAGGGATGGAGGAAGGGACCTTGGACTGCTGAGGAGGACAGACTGCTCATTGAGTATGTCAAGCTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAAAAGGAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCAGACCTCAAGAGGGGTCAGATAACACCACAAGAAGAGAGCATAATTCTAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACCCATTTCAAGAAAAAGGCCAAAAGTCCCTCTGATGCTGCTGAAAAGGCTAAAAATCGCCTCTTGAGGAGGCAGCAATTTCAACAGCAGCAGCAACAACAATTATTGAAGCAGCAGCAGCAGCAGGTTCAAATTCAACAGCAGCAACAACAACAACAGCAATTCAGCTTGGACATGAAAGGGATCATGAACTTGCTTGAGGGAAATGACCATAGAGTCCCTTCGATATCTCAAGAGACACAAGACATGGCCAGCATGTACTCAAATACAACAACAGAAGAGCAAGGATACTACTACTCCATGTTCAGTGGCAATAATGCCTCATCAGCAACAGAATCCTCAAACGAGGATATCTTTTGGGATGGACTGTGGAACTTAGATGATGTTCTTCTTTGCAATTTCAGTGCTACAAGCAAAGCCAGTTTAGTTGCTCCCTTCTGCTGA 795 0.4553 MYWGVMAGNMGWGVIEEEGWRKGPWTAEEDRLLIEYVKLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKAKNRLLRRQQFQQQQQQQLLKQQQQQVQIQQQQQQQQQFSLDMKGIMNLLEGNDHRVPSISQETQDMASMYSNTTTEEQGYYYSMFSGNNASSATESSNEDIFWDGLWNLDDVLLCNFSATSKASLVAPFC* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1315 264 Coils Coil 146 166 - -
Dod06g1315 264 CDD SANT 24 69 IPR001005 -
Dod06g1315 264 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Dod06g1315 264 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Dod06g1315 264 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Dod06g1315 264 Gene3D - 79 123 - -
Dod06g1315 264 Gene3D - 22 74 - -
Dod06g1315 264 SMART sant 74 122 IPR001005 -
Dod06g1315 264 SMART sant 21 71 IPR001005 -
Dod06g1315 264 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Dod06g1315 264 CDD SANT 79 120 IPR001005 -
Dod06g1315 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Dod06g1315 264 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Dod06g1315 264 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 254 IPR044676 GO:0003700|GO:0006355|GO:0043565
Dod06g1315 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Dod06g1315 264 PANTHER MYB TRANSCRIPTION FACTOR 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1315 Dod-Chr6 17480404 17481706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1315 17 264 MYB Transcription Factor Family AT4G13480 54.373 4.77e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod06g1315 Myb_DNA-binding 5.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1315 K09422 - gmx:100813935 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1315 06 17480404 17481706 Dod06g1315 06 17480404 17481706 ECH