Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1296 ATGAGTAATGAGGCTCATGGCATTTCAGGAGGAGCGGAATATAAAGATGCAGTGGTTGTCGGTTTGGGCGACAGAATCCCTTCTGATAATGATGAGGACAATATATGTATGCTGACTGGTGAAGAGTTTTCTGCTGATTTCTTACGGGATCGGGTTGCGTTAAGGAGATTTCCTGTCACTAATGATGCAGACCAACACCTTCCAAATAGGTTAGATTTCAACACTAATAATAATAATAATCAGATGGTTTATGAGGAACTAAATCATGTTCTTGGACTAAGGAGAATGGATTCCGATTGTAACTCGGATTTGTCAGAGTATGGTTCAGCTAGAGGATATTTTGCCGAGGTTGACAACCGGGCTTATCCTAATAATTTGAGCAGAATCCAGTTCGAACATGGTGGTATTAGGCAAGTATCAGGTCAACTTTCCAGCCAAGTATCTGGTCATTTTTCCAGACAAGGATCTGGAAATTTTTCTGAAGGAATTTGTTGTGATCGAGTTGCTTCAGGACCAGCTGCTACACCAATTTATGTTGTTGACTCTCCTCAGCCCATCCATCCGTTTGGAACGGCATTCTCTGAAGGTTCATTGTATAAAAAGATGAAATTTCTCTGTAGTTTTGGGGGAAGAATTCTTCCAAGGCCGAATGATGGGAAGCTCAGATATGTGGGTGGTGAGACACGGATTATATCCATTAAGAAGGACATCACATGGGAGGAACTTATGAGCAAGACTTCAGCGGTTTGCAATCAAACTCACATTATCAAATACCAGCTTCCTGGAGAAGACCTTGATGCTCTTATTTCTGTTTGTTCTGATGAAGATCTTCATCATATGATTGAGGAGTATGAACAGCTCGAAAGAGCTGGAGGCTCTCAACGATTACGGATTTTTCTCATTCCGTTAACCGAACCTGATAGTCCAAGCTGTAATGAAGCAATAGTCAATAAGCCAAGTGATACGGATTATCATTATGTTGTTGCTGTAAATGGTATGCTGGATCCAAGTCCACGGAAGAACTCCAGTGGACAGAATTTCCCAAGCCAGTTTGGAAATAACTCGGGTTACAACAGTCCAAGTTTCCATAGGGACTCATCCACATCTGCATTTGCTTTAGAGGTGAAGGATAGCAGCCCAACCTCCACAAATCTGGCAGGCCTACGCTCAATGCCTGCTGCTCAGTTTTCAACCACAATGCAGGTAGCAAGCAAGCTTAATCAAATGCCTTCTTTATCCCCCAGTTTTGTACAGCCTCAAGATCCTAAAGTTTCTGATGTACAGCTGTTCATGGATCATCCATACAATGTTGTCAATGAAAGCATTCTTCCATTTGTTATGGAAAATGCTCCATATGACAACTCTTTGTATGTAGACAATTCCAATTATGTTGATCCAATTGCATACTATAACAGTCTTGCTCAGGGGCATCCATATGTGAATTACCATCCTAGTAATCAATATGCAGTGGAGGCTGACCAGTTCAGGAAGCCTAGTGAAAATTTTCATTTTCACAGACAAGACCACAGTAATGATTTAGTCTCTTCTGCAATAAGTGGTCAAAATGATGTGATATTTGAGAGACCTTCAGTTACCAATGAAGTTTCATATCATTTTGACAAGATTGTCTCTCATCCCTATGAGTCATCAAGTTTACAGCCTATCTCTGATGATAAAGAGCAATCTCAGAACAGAGTGTTGCATTTACTTTCTGACTCACCCCTTCAGGGTAGTTATGAGAACATTAAAGTCCACTTGCAGTTCCCCCTTAGTGCAGAGAAAGACAAATTGCCCTCACTGGAAACTTTAATTCATTTGGAAGAATGTTCAATACAGCCAAAAAATACAATTGATGGGAAGGTGCATGAGGCTAAGTATCAAAATTTGACCACTTTTGGAATGTGTGACACTGGCAAGGGAGTTTCAGATATCAGAAAAGAGAGCTTGCAACATGCAGATAAAAGCAATGATCAGTTTGACAAATATGTTGCAGCTATATCACGAGACAGTGCCATAGATATAAAGCATTCACAGGGCATCAACTACCAACATGGAGTTTGCTCATCTTCACCAGATCTACAAAATAGTGAATGCAATGTTTCTGCTGCACCATTTAGCTCTTTGGAGTCCCCAAGAAACCAGAGGGAGCAACCGTGTGGTCTACCATTAGACACAACTGCTTCTGACTTTTCCATGAGGAGCCAAAATTCATCAATGCATGACCAATATTCTATGTCAGATAGAAAAGACGGCCAGCCACTTCCTTCTTTTGAGTTTCAACCTATTGAGTCCCAAACTAAACTAGAGTCCATACTGCCTATCTCTTATACAGACATGAGCGCTTCTTCCATGAGAGAGGTTGTTATCCCTGGTGAGGGTCCTGCACTTTGTCTGCACCACAAAGAAGAAAACACAGGCATTAACAAACAATCTTTGGGAAACATAAATGAACTTTATGTCTACAAGCCAGAATCAGTAGCTGTTGTCAAGGGGCCAATTGACTGTATTTCTACAGGTCTCCAGTCATGCTCACAAGTTGTCTCAAATGTAGATGAAGAGGTGCAAGTTGAATCTACATCTCCTGAAAAGGAAGTAGTAGAGAGTTCTTATCTAGAATCTGAAAGTGAGCTCGCAAAAGCTGATAGTAAAAACACTACTGGTGATATAGCAACTCTTGAAGCAGAGGCTGGAATTTATGGTTTACAGATTATTGAGAATATTGATCTTGAAGAACTGCAAGAGTTAGGATCTGGAACCTTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGGATTAAAAGTAGTTGTTTCTCTGGTAGATTATCAGAGCAAGACCGGTTGACTAGAGATTTTTGGAGAGAGGCACAGATTCTATCAACCCTTCATCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGACGGCCCAGGTGGAACATTAGCAACTGTGACAGAATACATGGTGCATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAGAAAGTGCTTGACCGTCGCAAAAGGATCGTGATAGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATCTACTTGTTAATCTGGGGGATCCTGAACGACCTGTATGTAAGGTTGCAGATTTTGGCCTATCAAGAATTAAACGCAACACGCTTGTTTCGGGTGGTGTCAGAGGAACCCTTCCGTGGATGGCACCGGAATTGCTAGATGGTAACAGTAATAGGGTATCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAGCCGTATGCCAACATGCACTGTGGTGCCATAATAGGAGGTATTGTCAATAATACGCTCAGGCCTCCAATTCCAAAACGCTGTGATTCTGAGTGGAAAAAGCTCATGGAAGAATGCTGGAGTCCTGATCCTGCAGCCAGGCCATCCTTCACAGAAATTAAAAACAGACTTCGCACCATGTCAGCTGCACTTCAGAGAAAGAGATATATTCGATGA 3561 0.4142 MSNEAHGISGGAEYKDAVVVGLGDRIPSDNDEDNICMLTGEEFSADFLRDRVALRRFPVTNDADQHLPNRLDFNTNNNNNQMVYEELNHVLGLRRMDSDCNSDLSEYGSARGYFAEVDNRAYPNNLSRIQFEHGGIRQVSGQLSSQVSGHFSRQGSGNFSEGICCDRVASGPAATPIYVVDSPQPIHPFGTAFSEGSLYKKMKFLCSFGGRILPRPNDGKLRYVGGETRIISIKKDITWEELMSKTSAVCNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEQLERAGGSQRLRIFLIPLTEPDSPSCNEAIVNKPSDTDYHYVVAVNGMLDPSPRKNSSGQNFPSQFGNNSGYNSPSFHRDSSTSAFALEVKDSSPTSTNLAGLRSMPAAQFSTTMQVASKLNQMPSLSPSFVQPQDPKVSDVQLFMDHPYNVVNESILPFVMENAPYDNSLYVDNSNYVDPIAYYNSLAQGHPYVNYHPSNQYAVEADQFRKPSENFHFHRQDHSNDLVSSAISGQNDVIFERPSVTNEVSYHFDKIVSHPYESSSLQPISDDKEQSQNRVLHLLSDSPLQGSYENIKVHLQFPLSAEKDKLPSLETLIHLEECSIQPKNTIDGKVHEAKYQNLTTFGMCDTGKGVSDIRKESLQHADKSNDQFDKYVAAISRDSAIDIKHSQGINYQHGVCSSSPDLQNSECNVSAAPFSSLESPRNQREQPCGLPLDTTASDFSMRSQNSSMHDQYSMSDRKDGQPLPSFEFQPIESQTKLESILPISYTDMSASSMREVVIPGEGPALCLHHKEENTGINKQSLGNINELYVYKPESVAVVKGPIDCISTGLQSCSQVVSNVDEEVQVESTSPEKEVVESSYLESESELAKADSKNTTGDIATLEAEAGIYGLQIIENIDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQDRLTRDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLLKKEKVLDRRKRIVIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVADFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSNRVSEKVDVFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPSFTEIKNRLRTMSAALQRKRYIR* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1296 1186 CDD PB1_UP2 205 301 - -
Dod06g1296 1186 MobiDBLite consensus disorder prediction 336 363 - -
Dod06g1296 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1034 1046 IPR008271 GO:0004672|GO:0006468
Dod06g1296 1186 SUPERFAMILY CAD & PB1 domains 217 307 - -
Dod06g1296 1186 MobiDBLite consensus disorder prediction 704 754 - -
Dod06g1296 1186 SUPERFAMILY Protein kinase-like (PK-like) 908 1172 IPR011009 -
Dod06g1296 1186 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 86 1183 - -
Dod06g1296 1186 Pfam Protein tyrosine and serine/threonine kinase 911 1172 IPR001245 GO:0004672|GO:0006468
Dod06g1296 1186 MobiDBLite consensus disorder prediction 335 363 - -
Dod06g1296 1186 SMART PB1_new 216 303 IPR000270 GO:0005515
Dod06g1296 1186 Pfam PB1 domain 217 300 IPR000270 GO:0005515
Dod06g1296 1186 ProSitePatterns Protein kinases ATP-binding region signature. 915 936 IPR017441 GO:0005524
Dod06g1296 1186 PRINTS Tyrosine kinase catalytic domain signature 991 1004 IPR001245 GO:0004672|GO:0006468
Dod06g1296 1186 PRINTS Tyrosine kinase catalytic domain signature 1028 1046 IPR001245 GO:0004672|GO:0006468
Dod06g1296 1186 PRINTS Tyrosine kinase catalytic domain signature 1099 1121 IPR001245 GO:0004672|GO:0006468
Dod06g1296 1186 PRINTS Tyrosine kinase catalytic domain signature 1143 1165 IPR001245 GO:0004672|GO:0006468
Dod06g1296 1186 Gene3D - 220 302 - -
Dod06g1296 1186 CDD STKc_MAP3K-like 915 1172 - -
Dod06g1296 1186 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1183 - -
Dod06g1296 1186 Gene3D Transferase(Phosphotransferase) domain 1 997 1184 - -
Dod06g1296 1186 ProSiteProfiles Protein kinase domain profile. 909 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1296 1186 MobiDBLite consensus disorder prediction 727 742 - -
Dod06g1296 1186 SMART serkin_6 909 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g1296 1186 Gene3D Phosphorylase Kinase; domain 1 903 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1296 Dod-Chr6 17228966 17234507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1296 39 415 MAP Kinase Kinase Kinase AT1G16270 35.204 5.52e-44 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dod06g1296 PK_Tyr_Ser-Thr 4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1296 - - aprc:113872358 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1296 06 17228966 17234507 Dod06g1296 06 17228966 17234507 ECH