Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1238 ATGTTGAAGCAGCGTCAAAACGCTTTTGTTCTTCTCTCTCTTTCAGCATTGCTTTTAGCATTCATTGGTCATTGTTCTGCTAATACTCAATTCATAGTGGGAGATTCAGCAGGATGGGTTATACCACCCTATCCAACTTACTACAGTAATTGGTCTCGCTCCCATTTCATGAGAGTGGACGACTCTCTAGAATTCAACTTCGACCCAAGATTCTACAACCTGATTCAGGTGTCACAGTATGAGTACGAGCACTGCACATCAATCGAGCCTCTAAAGGTATTCAACAGCAGCCCAGCAATTATTCCACTGAAGGAGAGAGGTGTTTTCTTCTTCATGTGCAGCATCTCAAACTACTGTTGTCTAGGCCAGAAGATTGCCATCTCAGTCCATGAAATTGCACCAAAGAACCCTCCATCACCATCACCTTCCCAAGCACCAATAGCATCTCCACCATCATCATCACCAAATGGTTCTGCCCCTAATGGAACTGTTGCTCATCCTCCAGCAACTAGTCCTATGGCTAATTCTTCTACTGCTCCTGGAGGCAGTGATGGTAGGAATTCTCCTGTGCCATCTTCCACTCATGGGGGGGCCAAGTCTAATGCAGTGGCATTGGTATGTGAGACAAGTTTCGTTGTGCCACTCTTGCATGTGTTGGGCACTTTTTTGGGGTTTTGGGTGATGTAG 687 0.4571 MLKQRQNAFVLLSLSALLLAFIGHCSANTQFIVGDSAGWVIPPYPTYYSNWSRSHFMRVDDSLEFNFDPRFYNLIQVSQYEYEHCTSIEPLKVFNSSPAIIPLKERGVFFFMCSISNYCCLGQKIAISVHEIAPKNPPSPSPSQAPIASPPSSSPNGSAPNGTVAHPPATSPMANSSTAPGGSDGRNSPVPSSTHGGAKSNAVALVCETSFVVPLLHVLGTFLGFWVM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1238 228 MobiDBLite consensus disorder prediction 135 149 - -
Dod06g1238 228 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Dod06g1238 228 MobiDBLite consensus disorder prediction 135 195 - -
Dod06g1238 228 CDD Stellacyanin 29 129 - -
Dod06g1238 228 PANTHER OS03G0648500 PROTEIN 13 136 - -
Dod06g1238 228 MobiDBLite consensus disorder prediction 150 195 - -
Dod06g1238 228 Gene3D - 28 138 IPR008972 -
Dod06g1238 228 PANTHER BLUE COPPER PROTEIN 13 136 IPR039391 GO:0009055
Dod06g1238 228 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Dod06g1238 228 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1238 Dod-Chr6 16479885 16481179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1238 9 181 Phytocyanin Superfamily AT4G28365 30.645 7.49e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1238 - - gmx:102662708 246.514